FMO12412.5prime Sequence
335 bp (335 high quality bases) assembled on 2012-11-28
> FMO12412.5prime
AGTCGACATGGTCTCCAAGTGGCTGCGCATCTTGGTTCTATTTCTTCTGG
GTCTTGCAACCTCGCGGGCCTCCCTATTTCGCTCCGAGTCGCCGAAACCA
CAGTTGAGCTGGTGGCACAAACAGTACTACCAGTCGCTATGGCAACAGAG
GCTGCGGTTTACGACGACTCCCCGGCCAGGAGCCACTCCCGAATCGGATG
AAGCCAGATTGGTGTATCCCTGCTACTGCTACAAGCCAACTCCCGAGGGC
TTGGCCACTGCCAGTCCGGTGGAGCAGCGAATGATTGAGACCAAGGAAAT
ATTCTTCTTGAACAAAGCAAGCTTTCTAGACCATT
FMO12412.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13557-RA | 436 | CG13557-RA | 10..318 | 8..316 | 1545 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23475816..23475991 | 316..141 | 880 | 100 | Minus |
2R | 25286936 | 2R | 23476276..23476409 | 141..8 | 670 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:37:06 has no hits.
FMO12412.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-28 09:33:32 Download gff for
FMO12412.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13557-RA | 6..318 | 1..316 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:24 Download gff for
FMO12412.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13557-RA | 6..318 | 1..316 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:13 Download gff for
FMO12412.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13557-RA | 6..318 | 1..316 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:13 Download gff for
FMO12412.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23475816..23475991 | 141..316 | 100 | <- | Minus |
2R | 23476277..23476413 | 1..140 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:24 Download gff for
FMO12412.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19363339..19363514 | 141..316 | 100 | <- | Minus |
arm_2R | 19363800..19363936 | 1..140 | 97 | | Minus |