Clone FMO12414 Report

Search the DGRC for FMO12414

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:124
Well:14
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG2249-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12414.5prime Sequence

223 bp (223 high quality bases) assembled on 2012-11-28

> FMO12414.5prime
GTCGACATGTTGGGCCGCAGCAGTGTGATTGCACGCAACTTTTCCCAGTC
GATGGTTCGCTTTAGCGGACATGGTGGAGTTCCCGGAGAGAATCTTCCCT
TCGGGCTGACGAACAAGTACCGCATCACCGCCCTGTTCACCATCGGCTGT
GTCTTGGGCTTCGGATCGCCCTTCCTGATCGTCAGGCACCAACTGCTCAA
GAAGGCAAGCTTTCTAGACCATT

FMO12414.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:19
Subject Length Description Subject Range Query Range Score Percent Strand
CoVIIc-RD 625 CG2249-RD 284..485 3..204 995 99.5 Plus
CoVIIc-RC 853 CG2249-RC 507..708 3..204 995 99.5 Plus
CoVIIc-RB 418 CG2249-RB 77..278 3..204 995 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:17
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10049751..10049866 89..204 580 100 Plus
2R 25286936 2R 10049557..10049644 3..90 425 98.9 Plus
Blast to na_te.dros performed on 2014-11-28 18:37:18 has no hits.

FMO12414.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-28 09:33:34 Download gff for FMO12414.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2249-RA 77..283 1..209 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:33 Download gff for FMO12414.5prime
Subject Subject Range Query Range Percent Splice Strand
CoVIIc-RB 76..282 1..209 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:19 Download gff for FMO12414.5prime
Subject Subject Range Query Range Percent Splice Strand
CoVIIc-RB 76..282 1..209 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:19 Download gff for FMO12414.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 10049753..10049870 91..209 98   Plus
2R 10049556..10049644 1..90 97 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:33 Download gff for FMO12414.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5937258..5937375 91..209 98   Plus
arm_2R 5937061..5937149 1..90 97 -> Plus