FMO12418.5prime Sequence
789 bp (789 high quality bases) assembled on 2012-11-28
> FMO12418.5prime
AGTCGACATGTCCTCCTCGTCGGCCAGAGACCAACCGGGAACCTCCCATG
ACAACTTCGAGGAATTCTACACAGAAGTGAAAGAAATTGAAAAACGTGAT
TCAGTTTTAACTCCTTCTCAACAAATTGATCGTTTACTTCGTCCAGGTTC
AACGTACTTCAATCTCAATCCGTTTGAGGTGCTCCAAATCGAGCCCGAGG
TCGAATTGGCGGATATAAAAAAGCGATACCGCACCTTGTCAATCCTCGTC
CATCCAGACAAGAATCCCGACAACCAGGAGCGCGCTCAAATGGCATTCGA
TATTGTGTCGCGTTCCTGGAAAATCCTCGAAAACGAACTCACGCGCAAAA
GGTGTCTGGAGGTGTACGAGGAGGCAAAGGGGCGAACGGATCAAATGATT
GCAGAAAAGCGTAAAAAGCTTAAAAAAGAGGGTCGGCCCACTGAGCCAAT
ATCCGAGGACGATCCCACCAAGTACAAGCACGCCATCTACGTTATGGTCA
TGAAACTGTTTGCCGACATGGAGCGTCGACGGCAAAAGCTCGACCAACGC
GACCAGGAGGAGCGAAAGCGAAAGCGCGAAACGGAAATCGAGGAGGAGGA
GCGGATAAAGGCGGACCGCGAATGGCAGCAGAACTTCGAAGAGTCGCGCC
AGAGCCGAGTAAACAGCTGGCATGACTTTCAGTCGGGTGCCGGCAAGTCC
AAGAAAGCCAAGAAACAAAAACATATGACCGGCATGATGGTTCCACCAAA
ATTTAAGCCCGAGTCGCGAGCAAGCTTTCTAGACCATTT
FMO12418.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10375-RA | 1008 | CG10375-RA | 90..852 | 7..769 | 3800 | 99.9 | Plus |
CG10375-RB | 938 | CG10375-RB | 160..782 | 147..769 | 3100 | 99.8 | Plus |
tst-RA | 4332 | CG10210-RA | 3903..4275 | 769..397 | 1850 | 99.7 | Minus |
CG10375-RB | 938 | CG10375-RB | 90..161 | 7..78 | 360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23768456..23768828 | 397..769 | 1850 | 99.7 | Plus |
3R | 32079331 | 3R | 23768009..23768329 | 77..397 | 1605 | 100 | Plus |
3R | 32079331 | 3R | 23767801..23767872 | 7..78 | 360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:37:37 has no hits.
FMO12418.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-28 09:33:37 Download gff for
FMO12418.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10375-RA | 82..855 | 1..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:45 Download gff for
FMO12418.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10375-RA | 82..855 | 1..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:28 Download gff for
FMO12418.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10375-RA | 82..855 | 1..773 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:28 Download gff for
FMO12418.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23767793..23767870 | 1..76 | 94 | -> | Plus |
3R | 23768009..23768329 | 77..397 | 100 | -> | Plus |
3R | 23768457..23768831 | 398..773 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:45 Download gff for
FMO12418.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19593515..19593592 | 1..76 | 94 | -> | Plus |
arm_3R | 19593731..19594051 | 77..397 | 100 | -> | Plus |
arm_3R | 19594179..19594553 | 398..773 | 99 | | Plus |