FMO12420.5prime Sequence
417 bp (417 high quality bases) assembled on 2012-10-19
> FMO12420.5prime
CCCTTCAATAGTTCCCATTTGATACCAGAGCCCCAGTTCTTTCAACACAC
CCAATCGTGCGAGGATCGAAACATTATAGTACACTATCAGACCAGCGCTC
CTGCTGTCCTCAGCGAAGACACCAGACACGCGAAGATCGAGTCCGAGGAG
AACTGGGATGACGACGAGAGTGTGCCCGATTACGATCCTCAGGTCTACTG
TTCCAGGGCCAACATAGTGAGAGAGCCCAATGGGTTGTTTCCCGCCCAGC
GAAGGGCTTTCATCGAGCAGGAAAAACGTCGTCACTTTGGCGAGGATTAC
GAGGAGGAGAAGAAGCCGCGGAAGGCCAAGGCTCGCGCGGATCTTCGTCC
CACTCCCTACGAGCACAGGAGGCCATACTCAAGGCGCCAGGCAAGCTTTC
TAGACCATTCGTTTTGG
FMO12420.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:15:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
arx-RA | 892 | CG3893-RA | 194..583 | 1..390 | 1950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:15:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18900904..18901251 | 390..43 | 1740 | 100 | Minus |
3L | 28110227 | 3L | 18901320..18901361 | 42..1 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:15:23 has no hits.
FMO12420.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:11 Download gff for
FMO12420.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3893-RA | 133..527 | 1..398 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:50:05 Download gff for
FMO12420.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3893-RA | 194..588 | 1..398 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:55:25 Download gff for
FMO12420.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arx-RA | 194..588 | 1..398 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:55:25 Download gff for
FMO12420.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18900902..18901251 | 43..394 | 99 | <- | Minus |
3L | 18901320..18901361 | 1..42 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:50:05 Download gff for
FMO12420.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18894002..18894351 | 43..394 | 99 | <- | Minus |
arm_3L | 18894420..18894461 | 1..42 | 100 | | Minus |