FMO12425.5prime Sequence
555 bp (555 high quality bases) assembled on 2012-11-28
> FMO12425.5prime
TCGACATGGCTTTCAAGTACAATACACAAATGATCCTGCTGAGCTGCGGT
TTGGCTGTGCTCTTGGGCTTCTCAGAAGCCCTACCTCGATACAGTCGAAC
CAAAGACCTGGGAACATCCGCCAGCTTCCCCAGCTTCGCCTATGCACCCA
GGCCACAGGAACCGATGACCCTCACTGGGAACTACAACCTCATCATGCCC
GACTACTACGATCACCATCCCGCGGAGTCCATGCAACTGCAAAACTTTGC
CAACTTCTACGATGCCCAAATGAGTCCCGACTCTGATCTCGGAATGGAGG
AATCGCAGTTTTTGAGCCACACTCCAGTGAGGGCACCTCAGCCCTTGACG
GCCGAGGAGAAACGTGCTCGTCAGCAGATTCCCCACGTGGACATCAACCG
GGAGAAGAAGGCCCTGCTCAAGCTAAAGAAGGGCAGCACCAAGCCCAGAT
TTTCCGATCACCAGGAGTGGGACCAGTTCGACTACGATTTGTACAGCCTG
AATCCCGGCGATAGCAAGAAGTACAACTACGATGCCGCAAGCTTTCTAGA
CCATT
FMO12425.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5391-RA | 782 | CG5391-RA | 151..681 | 6..536 | 2595 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22333189..22333693 | 536..32 | 2465 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:37:57 has no hits.
FMO12425.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-28 09:33:40 Download gff for
FMO12425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5391-RA | 147..681 | 1..536 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:57 Download gff for
FMO12425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5391-RA | 147..681 | 1..536 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:39 Download gff for
FMO12425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5391-RA | 147..681 | 1..536 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:39 Download gff for
FMO12425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22333189..22333692 | 33..536 | 99 | <- | Minus |
| 3R | 22333974..22334004 | 1..32 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:57 Download gff for
FMO12425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18158911..18159414 | 33..536 | 99 | <- | Minus |
| arm_3R | 18159696..18159726 | 1..32 | 93 | | Minus |
