FMO12430.5prime Sequence
1112 bp (989 high quality bases) assembled on 2012-10-19
> FMO12430.5prime
GTCGACATGCCCCGCGTGAAGCCCACCAAGAAGCTCGATGTTCTGGGAAA
TCTGGACCTGCGGCCGGAGGATGCCGTGGGGGACTATATCAGCTCTAAGC
AGCAGAACAAATTCTTCGTAATTCCACCGAACTCGGACTCTGCCGGCGAC
TCCATCGAACTGATATATGTGAACAATCTCCGCGAGCACGAAGCCATGCT
CAAGCTGCAGGAGGAGATGCTGACCAGTGCCAAGCGGCAGACCAAGCTGA
ACTCCGCCCGGGTGAGGAACATGTACAAGATCCAGGAGCGGCTGAGGCGG
CGCTTCATCGAGGTGAACAGCTTCATCAAGGACTGCGCGGACAAAAAGAG
AGTGGCCGAGAAGACCGCCCAAGCGGAGACGCTCAACCATAAGGAGCTCG
GCGAGGGCATTGAGAGCTTCAAGGACTCGATCGGCGAACTCAAGGCCTTT
TTTTAGGCTCTCAAGGCCACCGTGCAGGAGTTCCAGCCCTACGAGAAGGT
GCTCGACGAGGTGGTGAAGGTATCCGACATATTCGTCTCGCCAAAGGACT
GCACCGATCGCTGTGATGCGCTGATGCTGGCTCAAGTGGAGATCAACAAG
TTGGAGCATCAAAAGCTCCAGGACATCGAGAACATGCGGCAGCGTATGGT
GCAGATCACAAATGATGCGGCTCTAACTGTGCTGGGTCTAAAGAACGATC
TGGCCAAACTGGAACGATCCTACAACGAGTCCAGAGTGCAGTGCCTCAGA
TGGGAGAAGATCCTGGCCAAGACCAAAGACGCCATCAACAACAACTACAT
GGGACAAGGAGCGCACAATAGATGCGATTACCAACCTTCACCGAATCCTT
CTACGGCGAAGAGATGTACATTCGTTTCCCGCTCGCGGCGACTTGGACAA
GTGTTGGATGCCATCATGGGCGAAGTGAAATATTAACTGCGTTGTAAAGG
AAATCGAATCATCTGATCCCTCGATAAAGCACGAGAAGTCAGAAGATATA
GTTCGCTTGTGCCGCAGCTTTCTAGAACAATTCGGTTGCCGCCGCGTCCA
AGTTAAGGTGTCATATTCATTATTCATATCATATCATATTCCCAACTAGT
CTTAGGAGATTC
FMO12430.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:15:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17564-RB | 1305 | CG17564-RB | 207..1196 | 7..993 | 4740 | 98.9 | Plus |
| CG10750-RB | 1175 | CG10750-RB | 383..817 | 271..705 | 390 | 73.5 | Plus |
| CG10750-RA | 1175 | CG10750-RA | 383..817 | 271..705 | 390 | 73.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:15:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19298988..19299442 | 574..120 | 2215 | 99.1 | Minus |
| 2L | 23513712 | 2L | 19298642..19298929 | 863..575 | 1380 | 99.3 | Minus |
| 2L | 23513712 | 2L | 19299615..19299727 | 119..7 | 565 | 100 | Minus |
| 2L | 23513712 | 2L | 19298463..19298589 | 985..862 | 485 | 97.6 | Minus |
| 2L | 23513712 | 2L | 19300699..19300776 | 271..348 | 195 | 83.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:15:29 has no hits.
FMO12430.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:13 Download gff for
FMO12430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17564-RB | 117..1125 | 1..1007 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:50:10 Download gff for
FMO12430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17564-RB | 199..1207 | 1..1007 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:55:27 Download gff for
FMO12430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17564-RB | 199..1207 | 1..1007 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:55:27 Download gff for
FMO12430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19298463..19298587 | 864..985 | 97 | <- | Minus |
| 2L | 19298642..19298929 | 575..863 | 99 | <- | Minus |
| 2L | 19298988..19299442 | 120..574 | 99 | <- | Minus |
| 2L | 19299615..19299731 | 1..119 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:50:10 Download gff for
FMO12430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19298463..19298587 | 864..985 | 97 | <- | Minus |
| arm_2L | 19298642..19298929 | 575..863 | 99 | <- | Minus |
| arm_2L | 19298988..19299442 | 120..574 | 99 | <- | Minus |
| arm_2L | 19299615..19299731 | 1..119 | 96 | | Minus |
