Clone FMO12431 Report

Search the DGRC for FMO12431

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:124
Well:31
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15715-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12431.5prime Sequence

256 bp (256 high quality bases) assembled on 2012-11-28

> FMO12431.5prime
GTCGACATGGCACGTGGACACCAGAAGATCCAGTCGCAGGCGAAGGCCTC
CGAGAAGCAGGCCAAACTAAAGAAGCAACAAGGACACAGTGCCAACGACC
AGAAGAAGGCGGCCCAAAAGGCACTTGTCTATGTGTGCGCCGTTTGCAAG
TCGCAAATGCCCGATCCCAAGACGTATAAACAGCACTTCGAGAACAAGCA
TCCCAAGAACGACATACCCGAGGAGCTGAAGGAGGTCGCAAGCTTTCTAG
ACCATT

FMO12431.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:38:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG15715-RB 969 CG15715-RB 270..500 7..237 1155 100 Plus
CG15715-RA 735 CG15715-RA 233..463 7..237 1155 100 Plus
CG18081-RC 717 CG18081-RC 198..428 7..237 1020 96.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:38:21
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15836780..15836923 150..7 720 100 Minus
3L 28110227 3L 15834734..15834877 150..7 705 99.3 Minus
3L 28110227 3L 15836162..15836250 237..149 445 100 Minus
3L 28110227 3L 15834365..15834453 237..149 325 91 Minus
Blast to na_te.dros performed on 2014-11-28 18:38:22 has no hits.

FMO12431.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-28 09:33:44 Download gff for FMO12431.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15715-RA 228..461 1..237 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:13 Download gff for FMO12431.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15715-RA 230..463 1..237 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:54 Download gff for FMO12431.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15715-RA 230..463 1..237 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:54 Download gff for FMO12431.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15836162..15836248 151..237 100 <- Minus
3L 15836780..15836926 1..150 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:13 Download gff for FMO12431.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15829262..15829348 151..237 100 <- Minus
arm_3L 15829880..15830026 1..150 98   Minus