FMO12431.5prime Sequence
256 bp (256 high quality bases) assembled on 2012-11-28
> FMO12431.5prime
GTCGACATGGCACGTGGACACCAGAAGATCCAGTCGCAGGCGAAGGCCTC
CGAGAAGCAGGCCAAACTAAAGAAGCAACAAGGACACAGTGCCAACGACC
AGAAGAAGGCGGCCCAAAAGGCACTTGTCTATGTGTGCGCCGTTTGCAAG
TCGCAAATGCCCGATCCCAAGACGTATAAACAGCACTTCGAGAACAAGCA
TCCCAAGAACGACATACCCGAGGAGCTGAAGGAGGTCGCAAGCTTTCTAG
ACCATT
FMO12431.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:38:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15715-RB | 969 | CG15715-RB | 270..500 | 7..237 | 1155 | 100 | Plus |
CG15715-RA | 735 | CG15715-RA | 233..463 | 7..237 | 1155 | 100 | Plus |
CG18081-RC | 717 | CG18081-RC | 198..428 | 7..237 | 1020 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:38:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15836780..15836923 | 150..7 | 720 | 100 | Minus |
3L | 28110227 | 3L | 15834734..15834877 | 150..7 | 705 | 99.3 | Minus |
3L | 28110227 | 3L | 15836162..15836250 | 237..149 | 445 | 100 | Minus |
3L | 28110227 | 3L | 15834365..15834453 | 237..149 | 325 | 91 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:38:22 has no hits.
FMO12431.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-28 09:33:44 Download gff for
FMO12431.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15715-RA | 228..461 | 1..237 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:13 Download gff for
FMO12431.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15715-RA | 230..463 | 1..237 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:54 Download gff for
FMO12431.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15715-RA | 230..463 | 1..237 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:54 Download gff for
FMO12431.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15836162..15836248 | 151..237 | 100 | <- | Minus |
3L | 15836780..15836926 | 1..150 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:13 Download gff for
FMO12431.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15829262..15829348 | 151..237 | 100 | <- | Minus |
arm_3L | 15829880..15830026 | 1..150 | 98 | | Minus |