FMO12436.5prime Sequence
762 bp (762 high quality bases) assembled on 2012-10-19
> FMO12436.5prime
AGTCGACATGTCGGGGCAGGCGGAGCTCAAGGAGCTGGGCATGTTCGAGC
TGCGCCCGCTGATCACTAACATCAGCTGCAAGCTGTCCGCGGTGACAGCG
GGGCTGGACGAAAAGCGACAGTTCCTATGCCTCGTTTCTGAGGAAAACGA
GATCCTGCTGCGCTACATAAGCGCCGCCTCCGGCCAGGAGGTGGTCAAGA
TGATATCCTGGTTCCGCAACCGCGTCATCCACGACGTCTGCTTCGATCCG
GCGGGCGTTTGGCTGCTGGTGCTATGTTTCGACAACACACTGCACATCGT
GCCCGCCCTGGCGTTGGTGGACAAGGCCCATGGACTGTCCGCCTGCTCGC
TCTACAGCACCACCCAGGTCACCTCCTACATCATCCCCTTTGTGGGCCCC
CACGAGTGTCCCAACTCCAAAAAGTGCCCCAATCACTCCACCGGTCTGGA
ATAGTCCACGGCGGAGCCAATGGATCAGTTGGCTGAGAACCTAGAGCAGG
CCAGGTTGCAGGAAGGCGAAGAGGAGGAGCCTCTTGGCCACGACCTGCCC
GAGCACATGCTGGTGCGAAATAGCGGAACTGAGGATGCAGTGCAGCCACT
GCCGCAGCAGCAGCAGACGATCGATACCACCGGCAATAGCCTGGTGATGG
CAGCCTCTTTCATGGCGTCCAAGACCTGCCCCTATCCCTTGTCCGTCGTC
TGGTGAAAGACCAACAGTGGACAGAATAGGGCCATTATCGGCTACTCGGA
TGGCTCCATCTG
FMO12436.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:15:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ca-RC | 6398 | CG31037-RC | 94..852 | 4..762 | 3735 | 99.5 | Plus |
| ca-RA | 7026 | CG31037-RA | 521..1279 | 4..762 | 3735 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:15:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29807805..29808291 | 276..762 | 2390 | 99.4 | Plus |
| 3R | 32079331 | 3R | 29807331..29807604 | 4..277 | 1355 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:15:26 has no hits.
FMO12436.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:12 Download gff for
FMO12436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ca-RA | 81..842 | 1..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:50:07 Download gff for
FMO12436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ca-RA | 337..1098 | 1..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:55:26 Download gff for
FMO12436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ca-RA | 518..1279 | 1..762 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:55:26 Download gff for
FMO12436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29807328..29807602 | 1..275 | 98 | -> | Plus |
| 3R | 29807805..29808291 | 276..762 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:50:07 Download gff for
FMO12436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25633050..25633324 | 1..275 | 98 | -> | Plus |
| arm_3R | 25633527..25634013 | 276..762 | 99 | | Plus |
