Clone FMO12457 Report

Search the DGRC for FMO12457

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:124
Well:57
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG33641-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12457.5prime Sequence

562 bp (436 high quality bases) assembled on 2012-10-19

> FMO12457.5prime
AGTCGACATGAAAAGGTTATATTTCATATGTGGACTATACTTCCTTATGG
ACTTGGCTAAATGTGAAAATCGCAGGTTACGGATTTTCTTTGATGAGTTT
GCGATCAAGTATAAGGTGCCAGACATTTTCGAAAAAATGGATTGTAATTT
GTATCAAGCGAATAATCGAAGCTACGTCAACGTCGAGATGAAACTGAAAA
AGGAAGTTTCAGATTTGAATGTTCGCGCTATAATGGAGTTTTGGAAGCCA
AATGCCCAAAATAAAATGAAGTTGTACGACGTTCGAGTGGATGGATGTCT
TATACTCCGAACTATTCACAAAAATAAACTATTCTACTTCTATGTGAAGA
GCTTTAAAAAAACATTCCAATGTTGTTTTGTCGTGTCCCTTTTAAAGCGA
ACTTTACCTACAAAAGGGATGATTGGTTTTTGGACAAAAAAAACTACACC
TTTTGGTCCTGTTGGCCATTCCGCCGGTCACGAATATTTTACCACACGAA
TGGAAAACTTGTTGTACCCTGGGGCATTTTGCCAAAATAGCAGGTTTCCA
AACCTTTCGTTG

FMO12457.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:15:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG33641-RA 721 CG33641-RA 1..538 8..535 2180 95.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:15:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13529041..13529425 7..392 1850 99.2 Plus
Blast to na_te.dros performed on 2014-11-28 18:15:58 has no hits.

FMO12457.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:21 Download gff for FMO12457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33641-RA 1..495 8..500 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:50:33 Download gff for FMO12457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33641-RA 1..495 8..500 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:55:43 Download gff for FMO12457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33641-RA 1..495 8..500 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:55:43 Download gff for FMO12457.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 13529035..13529431 1..399 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:50:33 Download gff for FMO12457.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13529035..13529431 1..399 98 -> Plus