FMO12459.5prime Sequence
440 bp (440 high quality bases) assembled on 2012-11-28
> FMO12459.5prime
AATCGACATGCAAAACCTCTCCATATCCTGCTCATTGGTCTGCCTCATCA
TTCTGGGTAGTGCCGCCCTTGTGGGCGCCTTTGGCGTCTGCCAGCGCCAA
ATCAGCGCCATTTTAATCACAGGAGTGATGTATTTACTGGCGGCGCTCTT
TGCCCTCTTCACGCTCATGATCATTCACTTCAAGCGGCAGCAGGGACGTC
CCATGCTGGACAGCGACTACGATGGCACGGTGGATGGAATAGTGGCGCGA
CCAGGAGGCGTGGCCATAATGGCCAAGCCGCTGCTGGGAGCACGCATCTT
CCTCACCTCGTGGAGCCTCGACTTGGGATGGGGCGGTGTGGTGCTCTGCG
CCATCACCTCGGTACTGTGGATCCTGCTCTCCAAAATCATGCGGTACAAC
CCCTTCTCGGCGCTCATGATTGCAAGCTTTCTAGACCATT
FMO12459.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:38:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34135-RD | 3470 | CG34135-RD | 1827..2240 | 8..421 | 2070 | 100 | Plus |
CG34135-RC | 7398 | CG34135-RC | 5755..6168 | 8..421 | 2070 | 100 | Plus |
CG34135-RB | 3470 | CG34135-RB | 1827..2240 | 8..421 | 2070 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:38:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8750436..8750714 | 421..143 | 1395 | 100 | Minus |
3R | 32079331 | 3R | 8750780..8750915 | 143..8 | 680 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:38:34 has no hits.
FMO12459.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-28 09:33:46 Download gff for
FMO12459.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34135-RB | 1820..2245 | 1..428 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:20 Download gff for
FMO12459.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34135-RB | 1820..2245 | 1..428 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:08:01 Download gff for
FMO12459.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34135-RB | 1820..2245 | 1..428 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:08:01 Download gff for
FMO12459.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8750431..8750713 | 144..428 | 98 | <- | Minus |
3R | 8750780..8750919 | 1..143 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:20 Download gff for
FMO12459.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4576153..4576435 | 144..428 | 98 | <- | Minus |
arm_3R | 4576502..4576641 | 1..143 | 97 | | Minus |