FMO12460.5prime Sequence
414 bp (414 high quality bases) assembled on 2012-11-28
> FMO12460.5prime
AGTCGACATGTGGAAAATTCTGTGCGGGATCGTCGTTCTCGTGACGATTG
TGGTGAATCAGCTGTCTGAAGCAAGGGAAGTCCGCCGGCGAAGAGGCCTT
ATGCTCCAATTGGACAACTACCTTAGCTACGATGGAATAATGCAGTATCT
GGATGAGCTGGCTCTGTCCCACAGTAACCGGGTGACCCTAAAGGATGTGG
CTCGGACCTACGAGAACAGAGCCCTGAAAATGGCGATAATAACCAACGGA
GATGGACGTCCCGGAAAGAGAGTGATATTCTTGGATGCTGCCCTCCATTC
GCGTGAGTGGATGACTCCCGCCGCCGCCCTGCTCACCATCCATAAACTGG
TGGTGGAGTTTGCGGAGAATTCCGACCTTTTGACTGATTACGATTGGCAC
ATTATGCCACTGGC
FMO12460.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:38:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8539-RB | 1538 | CG8539-RB | 197..605 | 6..414 | 2045 | 100 | Plus |
CG8539-RA | 1319 | CG8539-RA | 37..445 | 6..414 | 2045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:38:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7498227..7498635 | 414..6 | 2045 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:38:40 has no hits.
FMO12460.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-11-28 09:33:47 Download gff for
FMO12460.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8539-RA | 32..445 | 1..414 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:24 Download gff for
FMO12460.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8539-RA | 32..445 | 1..414 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:08:05 Download gff for
FMO12460.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8539-RA | 32..445 | 1..414 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:08:05 Download gff for
FMO12460.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7498227..7498638 | 1..414 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:24 Download gff for
FMO12460.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7491327..7491738 | 1..414 | 99 | | Minus |