FMO12466.5prime Sequence
1041 bp (1005 high quality bases) assembled on 2012-10-19
> FMO12466.5prime
GTCGACATGGAGTCGATAGTGCACATTCTTTCGGATGCGTACCATACAAC
GCTCACGCGGGAGCTTTTCATCAACGAATGGGCTCAGGAACGCTTGAGTT
TTGGAAGGCCCCTTTGGCATTTTCTCAGCGTTCATTTGGAGCCAAACAAA
ATGTTCAACATCATTATCCCCCTATGTGGTATCTTCAGTCAGGAAATCCT
CGTGCATCTCTTCACGGCATTTACCCTGATTAGCACACTGAACTCCTTCG
AAAAATGGATATATCCGGAGACGCGTCCTTTGTGGTTTCTGCGAGAGCAG
TTTGCCAATAATGTGGTTGTAAAGAAACCGGCGGTGGCCTTGGAAAGTCA
TCAGCTGAGCTGCGAGATGACCGGTGGGCTGCCCTGCGCCCACTCAATGA
CCTTCACGGTGTTCGTACTCATCCTGGCCTCGTTCTTCTTCGTTCACTGC
TGGGATCGCTTTGCTGCGTTGCGCTCTTCCTTCTGCCGCTGCATAATGTA
CCTGCTGATCATTGGAATGGTGGTCTGTATGTGGCTGAGTCGCCTCTACC
TGGCCACCGAGTTTCTGCACCAGTGCATACTGGGAAGTTACCTGGGAATT
AGGTCTCTTTGCACCTTTGAGGGAAATGTGAAGTACTTGTTCTCGCGACC
ACGTCGCTATGCGGTCTCAGCTGTTTTCTTCTTGGGAGGATTGGCATTGT
CAGTGTACTATGTGAAGCTGGAACTGAATATCGATCCCCATTGGTCGGTG
CGAGAGGCATTTAAATGGTGTCCAGAAACCAACATATTTGCGTCATGAAA
GTTGGTCCAATCTTTGCACTTTGTCAGAGATCTGGGAAATCTAATGGATT
GGGCTGTGGGCTTCGCCACTATATAAGCTGGGAAATGAAACAATCATCAT
TTTGGCGGCGATGCCGATTCCTTGGAGTTCTTGGAGTTTGTCACTATGGA
TTGCGCTTTTCACGTTTAAGCAGTCTGTCGCTTCGTTCCTTGACCTATGA
TTCCTAAGAAATGTCATCCATCCCTAGTACTGATATAGTAC
FMO12466.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:16:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| G6P-RB | 1194 | CG15400-RB | 72..1106 | 7..1041 | 4740 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:16:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2814806..2815306 | 757..257 | 2505 | 100 | Minus |
| 2L | 23513712 | 2L | 2815379..2815545 | 258..92 | 835 | 100 | Minus |
| 2L | 23513712 | 2L | 2815604..2815689 | 92..7 | 430 | 100 | Minus |
| 2L | 23513712 | 2L | 2814424..2814590 | 1041..880 | 415 | 92.9 | Minus |
| 2L | 23513712 | 2L | 2814637..2814758 | 880..755 | 340 | 92.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:16:06 has no hits.
FMO12466.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:23 Download gff for
FMO12466.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15400-RB | 65..1106 | 1..1041 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:50:39 Download gff for
FMO12466.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15400-RB | 65..1106 | 1..1041 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:55:48 Download gff for
FMO12466.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| G6P-RB | 65..1106 | 1..1041 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:55:48 Download gff for
FMO12466.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2814424..2814589 | 880..1041 | 92 | <- | Minus |
| 2L | 2814638..2814756 | 757..879 | 92 | <- | Minus |
| 2L | 2814807..2815305 | 258..756 | 100 | <- | Minus |
| 2L | 2815380..2815544 | 93..257 | 100 | <- | Minus |
| 2L | 2815604..2815691 | 1..92 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:50:39 Download gff for
FMO12466.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2814424..2814589 | 880..1041 | 92 | <- | Minus |
| arm_2L | 2814638..2814756 | 757..879 | 92 | <- | Minus |
| arm_2L | 2814807..2815305 | 258..756 | 100 | <- | Minus |
| arm_2L | 2815380..2815544 | 93..257 | 100 | <- | Minus |
| arm_2L | 2815604..2815691 | 1..92 | 95 | | Minus |
