FMO12469.5prime Sequence
869 bp (818 high quality bases) assembled on 2012-10-19
> FMO12469.5prime
AGTCGACATGAAGCCATTCTTTATTGCCGCAGCGTTGCTGATCTCGACGG
TGTCCGCCTCTTGGCACGGAGCCGTCTCCACACAGTACCAGCACCTGGAC
CCGCACAGCCACACCTACTCCTACGGATACGCCGATCCCAACTCACAGAA
GCACGAGACGCGAAGCCATGACGGCACCACGCACGGCTCCTACTCCTACG
TGGATGGTCACGGTCATGTGCAGTCGGTGTCCTACACCGCTGATCCGCAC
CATGGCTTCAACGCCGTGGGCACCAACCTGCCTCAGGCTCCTCAAGTTCA
TGCCGCTCCCGTTTACGCTGCCGCCCACGCCCATGGCGCCTATGCTCCTT
ACGCCCACGGACCCATCCACATCCCGGTGCTGACCCACGGAGGCGTCCCC
GTCGATACTCCCGAAGTGCAGCACGCCAAGGCCGCCCATGCCGCTGCCCA
TGCTGCTGCCGCCCACAATGCCGGAGGACACCACCTGTACAAGCGGTCTA
TTTACGGCGGAGGATGGGCCTACGGACAAGCCGCCCATGTGCCGCTGACT
CATGGAGGTGTGCCCGTTTGATACTCCCGATGTGCAGGCCGCCAAGGCCG
AGCACTATGCCGCCCACGCCAAAGCCCTTTGGCCATGTAGCTCATGCCCA
CGGTGCTCCCGTTGAGACACCCGAGGTGCAGCCACGCCAAGGCTGCGCAC
TTTGCCCGCCCATGCTGCCGCCCGTTCTGGGACATGCCGTTTCCCCCAAT
TAACCACGGTGTCTATCACGGTGCCCGGTAATCCACAAATGGGAGTACCC
CGTCCAATACGCCCGAAGGGGAACTATGCCCAAGGCCCCCCTCTTAACCC
CTCCCTTGGTCCCATGTCT
FMO12469.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:16:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr92F-RA | 1858 | CG5494-RA | 161..957 | 8..816 | 3700 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:16:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20671136..20671880 | 20..770 | 3425 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:16:11 has no hits.
FMO12469.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:25 Download gff for
FMO12469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr92F-RA | 154..959 | 1..819 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:50:43 Download gff for
FMO12469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr92F-RA | 154..959 | 1..819 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:55:52 Download gff for
FMO12469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr92F-RA | 154..959 | 1..819 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:55:52 Download gff for
FMO12469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20671136..20671922 | 20..819 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:50:43 Download gff for
FMO12469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16496858..16497644 | 20..819 | 98 | | Plus |
