Clone FMO12474 Report

Search the DGRC for FMO12474

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:124
Well:74
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG11426-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12474.5prime Sequence

790 bp (763 high quality bases) assembled on 2012-10-19

> FMO12474.5prime
GTCGAAATGCGCGACGCACCAGAAGATCAGTCCGTAACGGTTTCCATGCC
GGCATCTGCATCCGGCTCTGCCGCCGGCTCCACGGGACCGTCATCGGATC
GCCGGATGACGCAGCGCCTGCTCGTGGAGCTCCTGGTGGTGGTGGTGCTC
GTCATTCCCATCTGCGTGTACGAGTTCGCGGTGGATCCCGTGCGACGCGG
CTTTTTCTGCGACGACGAGAGCATCAGCTATCCATTCCAGGACAACACCA
TAACGCCGGTAATGCTCGGCCTGATCGTGGGCCTGCTTCCGGCCCTGGTC
ATGGTGGTGGTGGAGTACGTTAGCCACCTGCGCGCCGGAGACATCTCGGC
CACGGTGGATCTGCTTGGCTGGAGGGTATCCACATGGTACGTGGAGCTGG
GCCGGCAGTCCACCTACTTCTGCTTTGGCCTGCTGCTCACCTTTGACGCT
ACCGAGGTGGGCAAGTACACCATCGGACGCCTGAGACCGCACTTCCTGGC
CGTTTGCCAGCCGCAGATTGCGGATGGGAGCATGTGCTCCGATCCGGTCA
ACCTGCACCGCTACATGGAGAACTACGACTGCGCCGGCGAGGGCTTCACC
GTGGAGGACGTGCGACAGGCCCGCCTCAGCTTTCCCAGCGGTCACTCTAG
TTTGGCCTTCTATGCCATGATCTACGTGGCACTCTACCTCCAGCGGAAGA
TCACCTGGCGGGGATCCAAGCTGAGCCGGCACTTTGTGCAGTTCGCATTG
TGATGGTAGCCTGTATACGGCCCCTCTCCGTGTAATGAAC

FMO12474.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:16:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG11426-RA 1882 CG11426-RA 588..1373 4..787 3790 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:16:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22472215..22473000 4..787 3740 99 Plus
Blast to na_te.dros performed on 2014-11-28 18:16:14 has no hits.

FMO12474.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:25 Download gff for FMO12474.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11426-RA 584..1374 1..790 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:50:45 Download gff for FMO12474.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11426-RA 586..1376 1..790 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:55:53 Download gff for FMO12474.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11426-RA 586..1376 1..790 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:55:53 Download gff for FMO12474.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 22472213..22473003 1..790 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:50:45 Download gff for FMO12474.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22465313..22466103 1..790 98   Plus