FMO12475.5prime Sequence
591 bp (590 high quality bases) assembled on 2012-10-19
> FMO12475.5prime
AGTCGACATGTCGGAAACTTCAGAGGACGAACAGACGCAGCTACAAACGA
GTGACGAAGAGGAGGATCTAGGTAGCGAGGAGGAGCAGGAAGATGAAGAT
AACAATCATAAGGAAGGGGACAGCGAGGCGGCACTAAGTGGTGAAGATGA
TAAAGGCTCCGAGGACGACGCAGCCGAGGAACAGAAGCTAACCTGGAAAG
ATCTCGGTCTCAATGAGGCTTTGTGTCAAGCATGTGACGAATTGAAGTGG
AAGGCGCCTTCGAAGATCCAACGTGAGGCCATTCCGGTCGCCTTACAGGG
CAAGGATGTAATTGGCCTAGCGGAGACCGGTTCCGGCAAGACGGGCGCCT
TCGCTCTGCCAATTTTACACGCCCTTCTCGAGAATCCGCAGCGGTATTTT
GCCCTCGTGCTAACCCCCACGAGGGAACTGGCATTTCAAATTGGCGAGCA
TTTTGAAGCCCTTGGTAGCGGGATTGGCATAAAGTGTTGCGTGGTACTCT
GCGGCATGGACATGGTATCCCAGGGTCTTCAACTGGCCAAGAAGCCCGCA
TATTATAATTGCCCACCGGGTCGCTTGATTGATCATCTAGA
FMO12475.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:15:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9253-RA | 1669 | CG9253-RA | 78..661 | 8..591 | 2800 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:15:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21143564..21143824 | 206..466 | 1290 | 99.6 | Plus |
| 2L | 23513712 | 2L | 21143306..21143504 | 8..206 | 995 | 100 | Plus |
| 2L | 23513712 | 2L | 21144011..21144138 | 464..591 | 485 | 95.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:15:01 has no hits.
FMO12475.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:04 Download gff for
FMO12475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9253-RA | 74..662 | 1..590 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:49:51 Download gff for
FMO12475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9253-RA | 72..660 | 1..590 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:55:12 Download gff for
FMO12475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9253-RA | 72..660 | 1..590 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:55:12 Download gff for
FMO12475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21143300..21143503 | 1..205 | 98 | -> | Plus |
| 2L | 21143564..21143822 | 206..464 | 99 | -> | Plus |
| 2L | 21144012..21144137 | 465..590 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:49:51 Download gff for
FMO12475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21143300..21143503 | 1..205 | 98 | -> | Plus |
| arm_2L | 21143564..21143822 | 206..464 | 99 | -> | Plus |
| arm_2L | 21144012..21144137 | 465..590 | 95 | | Plus |
