FMO12477.5prime Sequence
405 bp (347 high quality bases) assembled on 2012-10-19
> FMO12477.5prime
GTCGACATGACGACCAGCAGATCATCGGCGTCCGCGTCATTCAGTCGACC
GGCTTTCTGGAAGGTGCCCGGTTACGAATTGCCCACGTCCTATCGTCCAC
AGCCGACCCCAAAACCGCCGCTCGTACCGCTGCCATCGCCCTGCAGGCGG
CGCAGCAGCAGCGGACTGAAGAAGCGCGTCCATTTTGCCGATGAGCAAAA
CGTGGGGGTGCAAGTGGGCAGCCCAGCGCATGGCGAACTTCTAAGAGGCG
ACATCATCTCGAAGATCGGCGAGTACGACGCACGCGACCTGAGTCATGCG
GATGCACAGCAGCTGTTCCGCGGGGGCTGGCAACGAGATCCGGCCTGGTG
GGTGGACCAGGGACCAACCAAAATTCGCCCAACACGCAGGGGTGGCACCT
CAGGA
FMO12477.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:16:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Zasp66-RO | 1493 | CG6416-RO | 113..501 | 7..405 | 1685 | 96.5 | Plus |
Zasp66-RN | 1793 | CG6416-RN | 113..501 | 7..405 | 1685 | 96.5 | Plus |
Zasp66-RE | 1725 | CG6416-RE | 113..501 | 7..405 | 1685 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:16:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8624483..8624685 | 7..209 | 1015 | 100 | Plus |
3L | 28110227 | 3L | 8626960..8627094 | 207..342 | 615 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:16:20 has no hits.
FMO12477.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:27 Download gff for
FMO12477.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Zasp66-RE | 108..467 | 1..368 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:50:50 Download gff for
FMO12477.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Zasp66-RE | 110..469 | 1..368 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:55:57 Download gff for
FMO12477.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Zasp66-RE | 110..469 | 1..368 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:55:57 Download gff for
FMO12477.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8624480..8624683 | 1..207 | 98 | -> | Plus |
3L | 8626961..8627110 | 208..361 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:50:50 Download gff for
FMO12477.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8617580..8617783 | 1..207 | 98 | -> | Plus |
arm_3L | 8620061..8620210 | 208..361 | 96 | | Plus |