FMO12519.5prime Sequence
1093 bp (993 high quality bases) assembled on 2012-10-30
> FMO12519.5prime
AGTCGACATGTCGGCGAAAGCAATCACCGAGGCCTCCGGCAAGGACATCC
TGAACCGCCATCTCAACACCCATGGCGCCGGCGCGGCCACTTGCCGTTTT
TCCACAGTAAATTCCACGACAGATTGGTCCAAGCTCGCCGTTGACCATCC
CTGGCTGCTGACCACGCCGCTGGTGTGCAAGCCCGATCAACTTATCAAGC
GCCGTGGAAAGCTGGGACTAATTGGCGTCAAGAAGAACTTTGAGCAGGTG
AAGCAGTGGATTGGCGAGCGCCTCAACAAGGACCAGAAGATCGGAAATGC
CGTGGGAAAGCTCAGGAACTTTATCATCGAACCTTTTGTGCCCCACACCG
ATGCTGAGGAGATGTACGTGTGCATCTACTCGCACCGCGCCGCAGACACC
ATTCTGTTCTACCACCAGGGTGGCGTGGATATTGGCGATGTGGATGCTAA
GGCCGTGAAGTTGGACGTACCTGTGAACTCTTCTCTGTCGTTAGCCGACG
TGAAGAGCAAGCTGTTGAAGGAGGTCAAGGACGCGGGCACCAAGGAGCGC
ATTGCCAAGTTTGTCAGCGCCTTGTACACGACCTATGTAGACCTGTATTT
CACATATCTGGAGATTAACCCTCTGGTGGTGACAGCCGACAATTTGTACA
TCTTGGATTTGGCGGCCAAGTTGGATTCGACAGCTGATTTCATCTGCCGT
CCCAAATGGGGCGAGATTGACTATCCACCTCCGTTTGGTCGAGATGCATA
TCCCGAGGAGGCCTACATCGCCGACTTGGACGCCAAGAGTGGAGCTTCGC
TGAGCTGACGATCCTTAATCGTAATGGTCGTATCTGGACGATGGTGGCGG
GCGGTGGCGCCAGTGTCATTTACTCGGACACCATCTGCGATTTGGGTGGA
GCCTCCGAGCTGGCCAATTATGGCGATACAGTGGGGCTCAATCGGAACAG
CAGACGTACGAGTACGCAAAGACGATTCTCAAACTGATGACCTCCTCGCC
AAAGCATCCCGATTGCCAAGTGCTGATTACCGGAGGGGCATTGCTACTTA
CATGTGCTGCGACCTCAGCATCTACCGCCTTGCGAACTCAGCG
FMO12519.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:29:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ATPCL-RF | 3913 | CG8322-RF | 200..1240 | 7..1044 | 5070 | 99.3 | Plus |
ATPCL-RE | 4146 | CG8322-RE | 110..1150 | 7..1044 | 5070 | 99.3 | Plus |
ATPCL-RD | 3874 | CG8322-RD | 110..1150 | 7..1044 | 5070 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:29:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15997316..15998003 | 1038..353 | 3280 | 99.1 | Minus |
2R | 25286936 | 2R | 15998066..15998253 | 353..166 | 940 | 100 | Minus |
2R | 25286936 | 2R | 15999805..15999964 | 166..7 | 800 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:29:48 has no hits.
FMO12519.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-30 10:55:34 Download gff for
FMO12519.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ATPCL-RF | 191..1243 | 1..1049 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:56 Download gff for
FMO12519.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ATPCL-RD | 103..1156 | 1..1049 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:10 Download gff for
FMO12519.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ATPCL-RD | 103..1156 | 1..1049 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:10 Download gff for
FMO12519.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15997303..15998003 | 353..1049 | 98 | <- | Minus |
2R | 15998067..15998252 | 167..352 | 100 | <- | Minus |
2R | 15999805..15999966 | 1..166 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:56 Download gff for
FMO12519.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11884808..11885508 | 353..1049 | 98 | <- | Minus |
arm_2R | 11885572..11885757 | 167..352 | 100 | <- | Minus |
arm_2R | 11887310..11887471 | 1..166 | 97 | | Minus |