FMO12524.5prime Sequence
1083 bp (954 high quality bases) assembled on 2012-10-30
> FMO12524.5prime
GTCGACATGATCGATGCGGCCTGCAATTACTTAAATCCCTATGCGCAACA
GCATCAGGCGCAGCAGCAGCAACATGCGCAACATCAGCAACACGCGCAAC
AACAGCAACATCATCTGCACATGCAGCAGGCGCAACATCATCTGCACTTG
TCGCATCAGCAGGCGCAACAGCAGCATATGCAACACTTGACACAGCAACA
GCAGCAGCAGCAACAACAACAGCAGCAACAGCAGCAGCAACAGCAGCAAC
AACAACAGCCGCAACAGCAGCAACATGACTTCCTCAGCGCCGCCGCCCTG
CTGTCCGCCCCACCATCCCTATCCGGCTCGAGTTCCGGCTCCAGCTCCGG
CAGTTCTCCGCTATATGGAAAGCCGCCAATGAAGCTGGAACTGCCGTATC
CACAGGCCTCATCCACGGGCACCGCATCGCCCAACTCCAGCATACAATCG
GCGCCATCATCGGCCTCCGTGTCGCCCAGCATCTTCCCATCACCTGCCCA
GTCATTCGCCTCCATTTCGGCCAGTCCATCTACGCCCACCACGACCTTGG
CGCCACCTACAACGGCGGCAGCGGGCGCCCTTGCGGGATCACCCACATCC
TCCTCACCATCCTCGTCAGCAGCATCGGCTGCAGCGGCGGCAGCAGCAGC
TGCGGCGGCAGCAGCGGACCTTGGAGCAGCGGCGGTCGCCAGTGCCGCCT
ACGGCTGGAATACCGCCTACTCCGGATTGGGGCCAGCGAGAAGTCAGTTT
CCATATGCCCAGTACGCCTCCGATTATTACGGCAATGCGGTGGGCATGTC
CTCCTCGGCCGCTTGGTTCTCGCATCAGGAGCGCCTCTATCAGCCATGGA
GTTCACAGAGCTATCCGGGCTTCAATTTCGATGACATCGCCTTCCAGACG
CAATTGCAACGCCGCTTCGTTCGCTGCACGGTGCCCCATTGCACACGAGA
TGGAGCGCCTGCCACGATTGTGGGTCGGATGAGCCGGACGCAAGCAGCAT
ATCTGCCACATTCCGGCTGCAACGGCTAATACGGCAAGGCGTCCCATCTG
AGACCACTGCCTGGCAACCGGGGAGCGCCTTCT
FMO12524.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:28:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| btd-RA | 2934 | CG12653-RA | 487..1570 | 5..1077 | 4870 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:28:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9694672..9695407 | 5..740 | 3620 | 99.5 | Plus |
| X | 23542271 | X | 9695845..9696163 | 739..1051 | 1060 | 92.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:28:56 has no hits.
FMO12524.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-30 10:55:29 Download gff for
FMO12524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| btd-RA | 481..1556 | 1..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:30 Download gff for
FMO12524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| btd-RA | 483..1558 | 1..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:02:42 Download gff for
FMO12524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| btd-RA | 483..1558 | 1..1066 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:02:42 Download gff for
FMO12524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9694668..9695407 | 1..740 | 99 | -> | Plus |
| X | 9695847..9696182 | 741..1066 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:30 Download gff for
FMO12524.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9588701..9589440 | 1..740 | 99 | -> | Plus |
| arm_X | 9589880..9590215 | 741..1066 | 93 | | Plus |
