FMO12537.5prime Sequence
837 bp (835 high quality bases) assembled on 2012-10-30
> FMO12537.5prime
CGACATGAGCGACAGCGGTGTTTTCGCCTTCGAGCTTGGCGATGACCTAG
CCACACGCTGTGGCAATACACTCACTGGCGTCTTTGTGCCGGGCTCACGA
ATCGCACTCAGCGCCTACCGGCATGTGACGCACAGTTCGCGGGATGAGCC
CACAGAGAATGCTGGACAGGTTCCGGTGCTCATCTACATGGCGCAGGAGT
CGACGCTGTTCGACGAACCCGTTCTCCGCAGCGTACTCGCCGAGGCGAAT
GCCACGTTCGCCACGCTGCAACAGTTGGGTTCGCGGGCCACACGTGCCGA
GTATGTGAATATATCCCGGGCATACAGGAGCATTGTGCGCTCATGCCTGG
AGAAGCTGGAGCAGGCAAAAAAATCGCCGGAGGTTCAGACAGATGAGGCG
CGCCTGCAACGCTTATGTGATGCCATCGTTGTGTTCTATGCGGTAGAATG
CCTGTGGCATCTCTTCGAGATTCTGTACATTCAGAGCAATCAGCTGGTGG
TGCCGCAGCTGCTCGACTGGGCGCGTTTCCACTCGCCGCACGCAGAGGAC
AGAGCCACGGATCTACTGCTCATGGGAGAGGAGGCCAGCGAATCTGATGA
CTATTGGAGCATTGTCAAATCACTCATTATGCTGGGCGAAATAGATGTTA
CGAGAGCAGTTCTCTCGCAGAATCGCAAAGCTGGACAAACGAGCTTCAAG
GCGGCCGAACAGATCCTGAAGTCCATGCCAGTGTATCAAGAGGGCTATGC
CCTGCAGAAGTTTCACTCGCAGTGGGAGTTCTGGCACGTGGATACGGAAC
GCAAGATTCAATTCCGGCTTTATTTGCTACGGAGCCG
FMO12537.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:21:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nup75-RA | 2146 | CG5733-RA | 68..900 | 3..837 | 4080 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:21:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18166184..18166987 | 837..32 | 3885 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:21:40 has no hits.
FMO12537.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-30 10:54:43 Download gff for
FMO12537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nup75-RA | 55..889 | 1..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:00 Download gff for
FMO12537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nup75-RA | 66..900 | 1..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:48 Download gff for
FMO12537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nup75-RA | 66..900 | 1..837 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:48 Download gff for
FMO12537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18166184..18166987 | 32..837 | 99 | <- | Minus |
| 2R | 18167045..18167075 | 1..31 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:00 Download gff for
FMO12537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14053689..14054492 | 32..837 | 99 | <- | Minus |
| arm_2R | 14054550..14054580 | 1..31 | 96 | | Minus |
