FMO12541.5prime Sequence
1104 bp (997 high quality bases) assembled on 2012-10-30
> FMO12541.5prime
GTCGACATGATTGTCACCGCGAAGTTGGTGGCCATTGGGCTGGGCCTCGC
GCTCACGGCCTTCACCGTATCGACCATTGTCCTGGCCGTCCAGAAGGCGA
ATCTTAAGAGTGATTTGCGCGATGCCCAGGAGAAGTTGGATCTCCTGGAA
GCGGGATATACGAGCACAGCTGCTCCGACAACAGCGAGTACTGCGAATCC
TGGAAGCACAGCTTCTCCAGGAAGCACAGCTGAGCCGGGAAGCACAGCTG
AACCCGGAAGCACAGCTGAGCCCGGAAGCACAGCTTCTCCAGGAAGCACT
GTGACACCTGGTTCCACTGCTTCAACAAGTGAACCCGGCACTACTGCATC
CCCCGAAAAAATCGACTACCGACTGCCCGGAACTCTGAAGCCCACCCACT
ATGATCTCTATCTGTTTCCCAACATCGAAACTGGTGAATTCAGTGGACAG
GAGACGATTACTATTACAGTTGAAGAGGCCACCGACCAGATCGTCCTGCA
CTCCCTCAACCTAAACATTTCGAGTGTATCCATAATGAATACTGGCAGTG
ATACTTTGGAGATCCTGGAGACAACAGTAGATGCTGTGAGGGAATTTTTA
ATATTCCAGCTGAACGAACCACTGACAAAAGGTAGGACAGTAAGGCTGCA
CATTGGATTCGAAGGATCGATGGCCAACAAGATTGTGGGACTGTACAGTT
CGTCGTATGTGAAGGAGGATGAGACCCGCAAGTGGATCGCCACCTCCAAG
TTCGAACCCACCTACGCTCGCCAGGCTTTTCCCTGCTTTGATGAGCCAGC
ATTGAAAGGCCGAGTTCACCATTACTCTAGTGCATCCTTCTGGGGAGGAT
TACCATGCCCTGTCCAACATGAACGTGACTCGAGTGTCAGCCAGGGAGCC
TTCCAGGAGGTCACGTTTGCAAAAGTGTTCCCATGAGCACCTTACTTGGC
CCTGCTTTATTTGTCTCCGACTTCGCCTACAGCAGGTGGAGCAATGAACA
CCTAACGGCATTGAGAACCTTCCTCCATGAATTGTCTACGCCACCTCCCG
GGAACACACTCCGAACAAAGTGGGAATTCTTGGCTGTGGGACCAATTTGG
CAAG
FMO12541.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:22:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8773-RB | 3145 | CG8773-RB | 43..1076 | 7..1044 | 4820 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:22:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13294790..13295762 | 7..981 | 4585 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:22:06 has no hits.
FMO12541.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-30 10:54:46 Download gff for
FMO12541.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8773-RB | 36..1013 | 1..981 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:19 Download gff for
FMO12541.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8773-RB | 38..1015 | 1..981 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:03 Download gff for
FMO12541.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8773-RB | 38..1015 | 1..981 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:03 Download gff for
FMO12541.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13294785..13295762 | 1..981 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:19 Download gff for
FMO12541.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9120507..9121484 | 1..981 | 99 | == | Plus |
