Clone FMO12544 Report

Search the DGRC for FMO12544

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:125
Well:44
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15485-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12544.5prime Sequence

719 bp (719 high quality bases) assembled on 2012-10-30

> FMO12544.5prime
GTCGACATGGTCAACGCTTTGTGGGCCACGTTAATATCGCTCACTTTAAT
CGGCCGTGTTTTAGCCAACGATCTATTTTCCCTGCCACCCGCCACGAATC
ACAGAGAGGAAATGCTCGAGGATTATGGACGTTTCCTGCTGTCCACCATG
AACAGGACCATCGATCCGTGCGAGAACTTTTACGAATTCAGTTGTGGCGG
TTGGAAGAAGGCGGATTTGGTACCGGAACAGGCCAGGAATACCAGTTTTC
TAAACGCAATCCAGCACAAAATCGACGAGCAGATTCAGGGATTCCTGCAG
AATGCCACCAAAAGAGAGTTGGAGGATCTGGGAGTTAATGGCACCACGTC
GGCGGAGATTAAAGCCAAGCAATTCTATGCCAGCTGTGTGGAAATGAAGG
CCAACTTGTCGTTGGGTTATCAATATTTTATGGAACACGATGTGTTTTTC
TTAAAGGAGCGCAATGCGACCTACGATTGGATGTACATCAACTTTATGTC
CAAATACGACATATATCCTTTGCTAGCGCTCAAAGTTCACTATAGTACTT
CTTCGAGGAAGTTCGATATACTTTTAACGCTTCCCAGTAAAGTTTTAGCT
GGTTTCAGCGAGGAGCAGTTGAAAAATATGACCAGAGAGTTTTGGCTTGG
ATTCAAGTGCAGAGAAAGTCAAGCAATTTGTGGAGAACTTTTAACAATCT
AACGCAATTTGAAAGAAAT

FMO12544.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:22:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG15485-RB 2107 CG15485-RB 80..791 6..719 3430 98.9 Plus
CG15485-RA 2467 CG15485-RA 440..1151 6..719 3430 98.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:22:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12668564..12669275 719..6 3380 98.9 Minus
Blast to na_te.dros performed on 2014-11-28 18:22:22 has no hits.

FMO12544.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-30 10:54:48 Download gff for FMO12544.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15485-RA 434..1151 1..719 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:30 Download gff for FMO12544.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15485-RA 434..1151 1..719 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:13 Download gff for FMO12544.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15485-RA 434..1151 1..719 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:13 Download gff for FMO12544.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 12668564..12669278 1..719 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:30 Download gff for FMO12544.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12668564..12669278 1..719 98   Minus