FMO12547.5prime Sequence
1070 bp (961 high quality bases) assembled on 2012-10-30
> FMO12547.5prime
GTCGACATGGACAAGAAAGAAGTTCAACATCACCGCAGTCAACAGGCGAT
GACAAAATCTCTATACGCCATTGGGATGGGTCTTCTGGGAAAGTCGGCGA
CCAACATGGATTGTGCTAATACGAATTTAGAATCGGCAGGGAAGAGCTCC
TCAACGAATTATAACAGAAATCGGTTCTACAACGAAAGGTTCGTTCCGAT
GGCATCCGGAACTATGCCTTCCGTTTCGGGCACTAACCATCATTCTAGGC
ATCAACAGCTCCTTCTCCAACAAGCTCCCAAGTGCACTGCCGATCTCAAC
GAGAAATTAGTAAAAATCAATCGGCAAAACGCCAATAAGGAGCTATCCAC
CATTCAGGCAAAGGATATGCAATCCGTTGATAAAAACGAAGAGGCCCTAA
AAGAATTGCAGGAGAGCATTCCGGAAATCAACAAAATCTTCGATGTGCAC
TGTCGCATCGGCAGTGGAACCTTCAGCACAGTTCTCTTGGGAACCCTGCA
GCGGGAAAGGGGTCTCGTGGAAACCCAAAGGAGGAGATTCGCCATCAAAC
ATCATAATCCCACAAATCATCCGGAGAGGATTCTTAGAGAGTTGGAGTGC
ATGTATCGCATTGGTGGAGTGGAAAATGTAATCGGAATTAATTGCTGCAT
TAGATATAACGACAACGTGGCCTTTATCATGCCCTATATGACCCACGATC
GCTTTCACGACATTTACAGAAGCCTGAATTTCCCAGAGATACGCGACTAT
CTGAGGAACTTGCTCATTGCGCTGCGACACGTTCACAAGTTCAATGTGAT
TCATCGGGACGTCAAGCCAAGTAACATTCTTTATAACCGCAGACCGGGAA
AGTTTTTACTCTGCGATTTCGGATTGGCTCAAGGATAGCCGATGATGGTA
GTGTAGTGCAGTCGAGTGATCTCAGCTCCCGGGAAGTATTCTCCATTCTG
GGGGACTGGAGATGGTAGAGTGTGACGTTGACGGATGGCATCAGCCCAAG
CCGAGCTGAGATATATGCCGTCGAGGATGCGGCTCAGGTGGCGTGGAACT
GACGTGCTGTGACTGGACTT
FMO12547.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:20:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5790-RB | 2508 | CG5790-RB | 310..1390 | 7..1068 | 4885 | 97.9 | Plus |
| CG5790-RA | 2422 | CG5790-RA | 310..1390 | 7..1068 | 4885 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:20:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18295149..18296153 | 7..1005 | 4700 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:20:32 has no hits.
FMO12547.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-30 10:54:34 Download gff for
FMO12547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5790-RA | 241..1233 | 1..990 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:16 Download gff for
FMO12547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5790-RA | 305..1297 | 1..990 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:09 Download gff for
FMO12547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5790-RA | 305..1297 | 1..990 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:09 Download gff for
FMO12547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18295144..18296136 | 1..990 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:16 Download gff for
FMO12547.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18295144..18296136 | 1..990 | 98 | == | Plus |
