FMO12549.5prime Sequence
1095 bp (989 high quality bases) assembled on 2012-10-30
> FMO12549.5prime
TCGACATGGGCCTGCTGTCCGATCCGTCGATATCGACGCAAAGCAAGCTG
GTGGACGGACTGGCGCGTCATGTTCGCAAGGTGTGCTACGCCCTTTATGT
GGCGGGTGTGGCCTGGTTCTTCTGTTTGGCGCTGCCGGAGTTCAACCACG
GGACATATCTCTCCGAGAATGCTCTTTCGCCAGGCTTGGTCTATCCGGAG
ATCCGCATCGATGCGAATCGTCTGGCCATCCAGTTGCTGGAGGAGCTGCA
GCGGGAGCGAAAGGATCATCTGTCCACCACGCCGCACGCCTGGATTGCGG
CCAAGATGAACGAGTTCGGCCTGGAGACGCACACGCACAACTACACGTTG
CGCTACCCATTTGGCGGCGGTAAAGAGTATCACGGCAAGAATATCTACGG
CATATTGAGGGCCCCAAGAATTGCCTCCACGGAGGGCATCGTTTTTGCGG
CTCCATATCGCGCTGCCAGTTCCGTGCACACGGACATTTCCGCCAGCGTG
CCGCTTCTGCTGGCCTTCGCCGATTTTGCCCGGCGCAAGAACTACTGGGC
GAAGGATCTGATCTTCCTGATCACCGAACAGGAGCAGCTGGGCATGCAGG
CCTGGCTGGAGGCTTATCACGATGGCGACCGGGAACTGGACTTGAGCAAG
GCGTACCTGCGTCCTGGCAATTTGCCCGCTCGCGCTGGTTCGCTGCAAGC
GGCTCTGAATATTGAAGTTCAGGATCTGGAGATTGACCATGTGGATGTGC
GAATAGAGGGCTTGAACGGCAAGCTGCCCAATCTGGATATGTTCAATCTG
GTGCAGAGAATTATGGCCCGCGAGGGCATCGCCTCTGGCTATAAACAAGC
GCCACGCAAGAAGCGTCGTCACAGCCAGTCGCACTTCGAGCAGACTTCCG
CCAGATGCTGACCATGCTGGCCAGCCAGTCGTCAGGCGTACCCACTGGCA
ATCATGGGCTGTTCCACCGGTATCGGATTCGATGCTTTGAACATAGCTGC
CCATCGAGGGCCACCCATGCCCACACTGAAGGGCAGCCCAGAACGGGCAC
GGGTGCCCTTGCTGAAGGGCCATCGAAGGAATGCCAGGAGATCTG
FMO12549.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:22:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GAA1-RA | 2388 | CG3033-RA | 102..1186 | 6..1090 | 5125 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:22:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 5872121..5873020 | 1082..182 | 4100 | 98.2 | Minus |
X | 23542271 | X | 5873078..5873256 | 184..6 | 895 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:22:48 has no hits.
FMO12549.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-30 10:54:51 Download gff for
FMO12549.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3033-RA | 104..1160 | 1..1057 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:46 Download gff for
FMO12549.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GAA1-RA | 97..1153 | 1..1057 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:24 Download gff for
FMO12549.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GAA1-RA | 97..1153 | 1..1057 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:24 Download gff for
FMO12549.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 5872150..5873018 | 184..1051 | 98 | <- | Minus |
X | 5873079..5873260 | 1..183 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:46 Download gff for
FMO12549.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 5766183..5767051 | 184..1051 | 98 | <- | Minus |
arm_X | 5767112..5767293 | 1..183 | 98 | | Minus |