FMO12554.5prime Sequence
1081 bp (966 high quality bases) assembled on 2012-10-30
> FMO12554.5prime
AGTCGACATGATGGAAAATTACGAGGAAATTCGCCTGGGCCACATTAGGT
CTAAAGATCTGGGCAACCAGGTGCCAGACACTACGCAATTCTATCCGCCA
ACTAAGTTTGATTTTGGCGCGGAAATTCTGGCCTCAACGTCAACAGAGGC
AGAGGCAGAGGCAGAAGCAACAGCAACAACCACAGAACCAGCAACAAGCG
AACTTGCTGGCAAAGCAAATGGTGAAATCAAAACAAAAACATTGGCTGCC
AGGGAAGAACAAGAGATTGGCGCCAATTTGGAGCATAAAACCAAAAATCC
CACAAAGTCAATGGGCGAGGATGAAGATGACGAGGAGGAGGAGGAAGAGG
ACGATGAGGAGGAGGAGGAGGACGACGAGGAGGGAATCACCGGAACGAGC
AACGAGGATGAGGACTCCAGCTCAAATTGCTCCTCATCCGTGGAACTCGA
CTGGAAGCTGCGCTGGTTGCAACGAGAATTTTACACAGGTCGTGTGCCGC
GCCAGGTTATTGCCAGCATTATGCCGCATTTCGCCACCGGCCTGGCGGGC
GACACCGACGACTCCGTGCTGTGGGACTATTTGGCCCACCTGTTGAACGA
GCCGAAGCGGCGCAACAAGCTGGCCTCAGTGAACACCTTCGACGATGTCA
TCAGTTTGGTCAAGAAATCACAGAAGATCATTGTGCTAACGGGAGCCGGA
GTATCCGTCTCCTGCGGCATTCCGGACTTCCGGTCCACCAATGGCATATA
TGCGCGATTGGCCCATGATTTTCCCGATCTGCCCGATCCGCAGGCCATGT
TTGATATCAACTACTTCAAGAGGGATCCACGACCGTTCTACAAGTTTGCC
CGCGAGATATATCCCGGCGAGTTTCAGCCCTCACCCTGCCATCGTTTCAT
CAAAATGCTGGAGACCAAGGCAAACTGTTGCGCAACTACACACAGAACAT
CGACACCCTCGAGCGGGTGGCAGCATTCAGCGAGTAATCGAGTGTCACGC
TTCTTTTCACGCCTCGTGCACAATGTTCGTTTCAGTGCAACGCCTGACGC
CCTGCAGGCGACATATTTGGCAAGCGATCCG
FMO12554.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:23:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sir2-RA | 3809 | CG5216-RA | 428..1504 | 8..1077 | 5060 | 98.5 | Plus |
DnaJ-H-RB | 2035 | CG9828-RB | 1..82 | 89..8 | 410 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:23:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13165991..13166984 | 8..999 | 4855 | 99.7 | Plus |
Blast to na_te.dros performed 2014-11-28 18:23:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6781..6846 | 131..196 | 159 | 71.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2346..2476 | 135..264 | 157 | 60.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6727..6813 | 131..217 | 147 | 63.2 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3284..3375 | 149..241 | 147 | 64.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2312..2437 | 149..270 | 144 | 60.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2360..2486 | 131..251 | 142 | 61.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2348..2413 | 131..196 | 141 | 68.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6748..6813 | 131..196 | 141 | 68.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6793 | 149..218 | 134 | 65.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6847..6912 | 131..196 | 123 | 65.2 | Plus |
FMO12554.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-30 10:54:55 Download gff for
FMO12554.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sir2-RA | 441..1517 | 8..1077 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:55:06 Download gff for
FMO12554.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sir2-RA | 428..1504 | 8..1077 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:39 Download gff for
FMO12554.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sir2-RA | 428..1504 | 8..1077 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:39 Download gff for
FMO12554.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13165991..13167067 | 8..1077 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:06 Download gff for
FMO12554.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13165991..13167067 | 8..1077 | 98 | | Plus |