FMO12555.5prime Sequence
590 bp (473 high quality bases) assembled on 2012-10-30
> FMO12555.5prime
CTATTCCGGCAATATAAGCATCAGCCTGCAAGTACTGGAGCCCATAGCCT
TCATCCCAGTCCATGTGAAGCAACTGAATGTGAGCACCGTTGAGGTGAAG
CGCCTGGATGAATCTGGAGCGCCGCTTAAGGACATCACCCCCACGCTGAC
CTTTGCCCATCCGGAGTTTGAGTACTGGGTGACCGAGTTCGAACAGCCGC
TGGAGGCGGGAAACTACTCACTGCTGCTCAACTTTACGGGATCGCTTGTA
GATCGGATTACGGGGATGTACCAGAGCTCCTACTTGGATAAGCTGAAAAC
CCGCTCCAGATCAATCATTTCCACAAAGTTTGAGCCCACTTATGCCCGCC
AAGCATTCCCCTGCTTCGATGAGCCCGCCCTTAACTCAGTTCACCATAAC
GGTGGCCCGTCCAAGTGGTGATGAGTACCATGTGCTGTCCAACATGCCAG
TGCCAGCGAGTATGTCGATGGCGATATCACCGGAGGGTGACTTCGCCGGA
GACGGTACCATGGACACCTATTCTGGCCGCCTTTTGTGTGTTCTGATTTC
ATACAGAACCACTGTGGAGGAACAGCACTCGCCTTGAAAG
FMO12555.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:23:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32473-RB | 3002 | CG32473-RB | 262..857 | 1..590 | 2445 | 95.7 | Plus |
CG32473-RC | 3635 | CG32473-RC | 895..1490 | 1..590 | 2445 | 95.7 | Plus |
CG32473-RA | 3273 | CG32473-RA | 840..1128 | 308..590 | 925 | 91.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:23:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13309647..13309955 | 1..309 | 1530 | 99.7 | Plus |
3R | 32079331 | 3R | 13310143..13310321 | 307..482 | 780 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:23:29 has no hits.
FMO12555.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-30 10:54:55 Download gff for
FMO12555.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32473-RC | 893..1488 | 1..590 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:55:10 Download gff for
FMO12555.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32473-RC | 895..1490 | 1..590 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:43 Download gff for
FMO12555.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32473-RC | 895..1490 | 1..590 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:43 Download gff for
FMO12555.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13309647..13309955 | 1..309 | 99 | -> | Plus |
3R | 13310146..13310432 | 310..590 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:10 Download gff for
FMO12555.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9135369..9135677 | 1..309 | 99 | -> | Plus |
arm_3R | 9135868..9136154 | 310..590 | 91 | | Plus |