FMO12558.5prime Sequence
1025 bp (937 high quality bases) assembled on 2012-10-30
> FMO12558.5prime
GTCGACATGTCTATCTCAGTGAAGCGGAAAACGGTGATTTCACCGCAGGA
ACTCCTGAAGACACTCGAGCTGTCCGGCGAAGAGGACCTCGATCTGCAGA
TCAAGAACTGGGTGATGTGGGACCGCAACGAGGCGACGCTCCAGCAGGTG
ACTGAGGCAGTCAGGGATCAGGATTGGAAGGCGTTGCGGGTGAGACTGTG
CCATAGGATCACCTATTTGACAACTGGCTTGAGGGGAGTGATGCGCGCAG
GCTTCGACTCTTTGAACGATGTGGTGATCATCGAAGTGGCCCAGGGCATC
TGCGCCTACCTCGTCGATGCCTATCCAAGCATCCAGAAGAGGCAAACACA
GGGCGTGGTCGTTGGCTACGATGGCAGGTACAATAGCAAGCGGTTTGCCC
AACTCATCGCCACCGTGTTCCTGAACAACGACTTCAAGGTGTTCCTCTTC
ACTCGGATGATTCCGACACCCTTTATACCCTTCACCGTCGTCACGCTCCA
GTGCCTGGCGGGGATCGTGGTCACTGCCTCCCACAACGTTAAGGAGGACA
ATGGCATCAAGGTATATTGGTCGAATGGGGCTCAGGCGATGGCACCGCAC
GATCAGCGGATTCATGACTATATGATGAATAACCTAGAACCAAAGCCTTC
GTCCTGGGAAACTTCACTGGTACTTGACCATCCCTTGGTGGAGGATCCCT
ATCGTCAGATATACCCACTCTTTTACGAGGCTCTCAAGACGCTTATTCCC
CCAATTTACCTGTAACTAATGAGTGCAGCCAGTTGAGGTTCATCTATACA
GCTCTTCACGGTGTGGTTATCCCTTCATGAGGGAGGCCTTCTACCAGGCG
CGACTCAGCCGGTTATTCCCGTCGTGGAACAGAAAAGGCCGATCCAGAGT
TTCCCACCTCGTTAACCTAAATCCGGAAGAGGGTAATGAAGCGCTGAAGC
TGGCCTTAAAGAATGCGATGCGAACACATGCACTTGGTTCTGGCCATAGA
TCGGAAGTGGATATGCTTGGCTGTG
FMO12558.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:22:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10202-RA | 2059 | CG10202-RA | 73..1098 | 7..1025 | 4685 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:22:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14818988..14819915 | 929..7 | 4330 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:22:35 has no hits.
FMO12558.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-30 10:54:50 Download gff for
FMO12558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10202-RA | 65..1086 | 1..1012 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:38 Download gff for
FMO12558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10202-RA | 65..1086 | 1..1012 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:17 Download gff for
FMO12558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10202-RA | 65..1086 | 1..1012 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:17 Download gff for
FMO12558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14818988..14819919 | 1..929 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:38 Download gff for
FMO12558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10706493..10707424 | 1..929 | 98 | | Minus |
