FMO12564.5prime Sequence
1083 bp (988 high quality bases) assembled on 2012-10-30
> FMO12564.5prime
AGTCGACATGATCTACTATATGCTACTCATACTGCCCGTGGTCCTGGCCC
AGGATCAGCAGCACACCACGGAATCGCTGTCCACCAAGCACCACCAGCAG
CAGCAGCTGTCGCACTCGAATGCGATAATGGGTGAGGCTGGGGTCTCCAA
CTCGCAGCTAATGCAGCCCTCGACTCCGGCGCGAACCCTGCGACCCTTGA
CCGCGGGCGCGGGTGGTGACCCTTCGCTGTATGACGCCCCCGACGACTGT
CACTTCATGCCAGCAGCGGGTCTGGATCAGCCGGAAATAGCCTTAACGTG
CAACCTGCGCACGGTGAACAGCGAGTTTGACACAACCAATTTCAGTGTTA
TACCCGCCGAGCACACGATTGCCCTGCACATACTGTGCAATGACGAAATC
ATGGCCAAGAGTCGCCTGGAGGCGCAATCTTTCGCCCATCTGGTTAGGCT
CCAGCAGCTGTCCATCCAGTATTGCAAGCTGGGGCGACTGGGTCGCCAGG
TTCTGGATGGTCTGGAGCAGCTGAGGAACCTGACGCTCCGGACGCACAAC
ATCCTGTGGCCAGCGCTGAATTTCGAGATAGAAGCGGATGCCTTCTCGGT
CACTCGGAGGTTGGAGAGACTGGACCTCAGTTCGAACAACATCTGGTCCC
TGCCGGATAACATATTCTGCACCCTGTCCGAGTTGTCTGCCCTGAACATG
AGCGAGAATCGCCTGCAGGACGTCAACGAGCTGGGCTTCAGGGATCGCAG
CAAGGAGCCAACCAATGGTTTCCACCGAATCCACCTCCACCACCGAATCG
GCCAAAAAGAGCAGTAGCTCAAGCACCAGTTGTTCGCTGGACCTGTAGTA
CCTGGATGTGAGCCACAATGATTTCGTCGTGCTGCCAGCAAATGGATTTG
GGCACTCTGAGGAGGCTGCGAGTCCTTTCGGTCAACAACAATGGCATCTC
CATGATTGCGACAAGCTCTCAGTTGACTGAAGAACCTGCAGATCTGAACT
GAACTCCAACAAATCGTGGCCTGACCAAGGAACTCTTCGCTGACAGGCCA
AGAATAATCCAGAAGGGTACTGCCAATATTCCT
FMO12564.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:24:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Toll-6-RC | 7624 | CG7250-RC | 534..1584 | 8..1053 | 4935 | 98.5 | Plus |
| Toll-6-RB | 5746 | CG7250-RB | 534..1584 | 8..1053 | 4935 | 98.5 | Plus |
| Toll-6-RA | 5517 | CG7250-RA | 534..1584 | 8..1053 | 4935 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:24:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15337225..15338264 | 8..1043 | 4720 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:24:32 has no hits.
FMO12564.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-30 10:55:03 Download gff for
FMO12564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Toll-6-RA | 519..1583 | 1..1061 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:55:44 Download gff for
FMO12564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Toll-6-RA | 527..1591 | 1..1061 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:19 Download gff for
FMO12564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Toll-6-RA | 527..1591 | 1..1061 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:19 Download gff for
FMO12564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15337218..15338282 | 1..1061 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:44 Download gff for
FMO12564.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15330318..15331382 | 1..1061 | 97 | | Plus |
