FMO12575.5prime Sequence
1123 bp (1004 high quality bases) assembled on 2012-10-30
> FMO12575.5prime
AGTCGACATGGATGTTGGTGGCCAGGAAACCCCCTATGAGCCGCTGGACG
GACGTGGTTCCGGGCGTTCGAGGAGCAGTCATTCCACAACCGGATCCGGC
CTGAGGCGTCCAGGCAGCATGGACAGTCCGGAGTTCGATAACCGTGCACC
CAAGGATCAGAGGCACTCCGTCTACCTGGCCCTACTGGCAGCGGGCATTG
GTTTTGTGTTGCCCTACAATAGTTTCATTATTGCGGCGGACTACTGGCAG
GCACGATTCCCGGGTCGCCCGGTAGCCCTGGACATGTCGATGACATACAT
CTTCGTTGCCTTCGGCACCGTTTTGATGAACAACATTGTGCTATCGGTGG
CACCGTTCCAGTCGCGAGTGCTCTTTGGCTACATGATATCCTTCACCACA
CTGATCTTTGTCGCGGTGTGCGAGGTGGCTTGGCATATGTTCGCCACAAA
TACCGCCTATTTGGTGAATATGTCAGCTGTTGCCCTGACCGCCATCGGAT
GTACTGTGCAGCAGTCGAGCTTCTATGGATTCGCCTCCATGCTGCCCAAG
CAGTATACCCAGGCGGTGATGGCCGGCGAGAGTATCGCCGGTTTCCTGGT
GTCTTCCAATCGGGTCGTTACCAAATTGCTGATTAACAACGATCGCGTGT
CCACGGTGATCTTCTTTTTGACCTCAACGCTCTACATACTCTTCAGCTAC
CTGTTGCATGTGGCCACCATTAACTCGCCGTTTGTGCGGTTCCATGTGGA
GGCCTGCTCCAAGATCGTTTTGCGGCCGGATGAGCAGGAGATTGATGGAG
TTCCAAGTAGTACTCGATATGGTGTGCTCTCGATGGACGGTACCCACACC
ACGACCACATCGGGTTGGACCTCCAGGCACTGGAAATACCCTTAGTTTTA
GCAATCCCGTCTACGAGCTATCCAACCCGACTGCCGGCGAAGAGTAGCAT
TGAAGCCCTTCGGACAGCTGCCCGACTTCCGGCCACGCCCCAGGCTCAGG
AGCTACAACGCCCACGACGTGCCTTCCAAGTGATACCGTTATTCACTGCC
ACGTCGTTGCCGGCCAGCAAGTGGTGAACTTCCGTAGGGAATTCTGACCG
ATGCCATGTCAGGGATCTACCGC
FMO12575.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:25:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ent3-RC | 3363 | CG11010-RC | 403..1469 | 7..1072 | 4980 | 98.3 | Plus |
Ent3-RA | 2839 | CG11010-RA | 403..1469 | 7..1072 | 4980 | 98.3 | Plus |
Ent3-RB | 3360 | CG11010-RB | 403..1466 | 7..1072 | 4925 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:25:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12854450..12855013 | 221..784 | 2820 | 100 | Plus |
3L | 28110227 | 3L | 12854048..12854263 | 7..222 | 1065 | 99.5 | Plus |
3L | 28110227 | 3L | 12855186..12855421 | 783..1019 | 915 | 97.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:25:39 has no hits.
FMO12575.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-30 10:55:10 Download gff for
FMO12575.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ent3-RA | 388..1472 | 1..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:56:28 Download gff for
FMO12575.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ent3-RA | 398..1482 | 1..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:55 Download gff for
FMO12575.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ent3-RA | 398..1482 | 1..1084 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:55 Download gff for
FMO12575.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12854043..12854263 | 1..222 | 97 | -> | Plus |
3L | 12854452..12855013 | 223..784 | 100 | -> | Plus |
3L | 12855188..12855433 | 785..1030 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:56:28 Download gff for
FMO12575.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12847143..12847363 | 1..222 | 97 | -> | Plus |
arm_3L | 12847552..12848113 | 223..784 | 100 | -> | Plus |
arm_3L | 12848288..12848533 | 785..1030 | 96 | -> | Plus |