FMO12585.5prime Sequence
991 bp (984 high quality bases) assembled on 2012-10-30
> FMO12585.5prime
AGTCGACATGAGAAAGCAAAAGGACGATATGCAGGTCAATGTCGCTGGTC
TGCGCAGAAACATCAAGAACCTTGCGCACAACTACTCCGATGCCCAGGTT
AAAGTGCGTGAGGCAACCTCGAATGACCCTTGGGGTCCTTCGGCTGCCAT
CATGAGCGAGATAGCGGAACTCACCTACAATGTGGTGGCCTTTTCGGAAA
TCATGCAGATGATCTGGAAGCGTCTTAATGACCACGGCAAGAACTGGCGA
CATGTGTACAAGGCACTCATTTTGCTGGAGTATCTGATTAAAACCGGCTC
GGAAAAGGTCGCCCAGCAGTGCAAGGAGAACATCTTTGCCATTCAAACCC
TGCGAGAGTTTGTGTATTTCGAAGAGGGCAAGGATCAGGGCACCCATGTC
CGTGAGAAGGCCAAGCAGCTGGTCACTCTTCTTAAGGATGACGAGCGACT
GAAGAATGAGCGTGTGAAGGCGCAGAAGGCAAAGGAAAGATTCGCCCAGA
ACCCGAGTGGGTTCGGCAGCGATGGCTATATTGATGGACCATCGCAACGA
GACTTGCCGCCAGGCTGGCAGGAGGAGCCGCCTAAATCGGTATCCGAACT
GGAAATGGTTCGTCCCCAGACGGCCGGCGAGGAGGAACTTCAACTGCAGC
TGGCCATGGCCATGTCACGAGAGGAAGCGGAACAGGAGGAGGCCAAGCGA
CGCAGTGATGATGTGCGTCTGCAACTCGCCCTCAGCCAGAGTGAGCAGGA
TTTCAAGGATCCAAACGGACGACCTATTCCTGCGCCCAAGAAGGAGGAAC
AACAGAGTCTTTTGCTAGATCTGCTGGATATTTCTCTGGGGGCTACGAGC
ATCTCAGTCCGCCGCTGGGCGCTGCAGGCGGCGCCCTCACGGCTGTTGTC
GATCCCTGGGCCATGCCAGGTCCAGGAGCTCCCAAGCCAGTTGTCCGATC
GTGGTCAGTACTTCCTCGCCTCAAGTGGATCCCGGAATCCT
FMO12585.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:26:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lqf-RJ | 4183 | CG8532-RJ | 564..1549 | 8..990 | 4765 | 99.2 | Plus |
lqf-RI | 3810 | CG8532-RI | 564..1549 | 8..990 | 4765 | 99.2 | Plus |
lqf-RF | 3606 | CG8532-RF | 419..1404 | 8..990 | 4765 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:26:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7533504..7534166 | 95..757 | 3315 | 100 | Plus |
3L | 28110227 | 3L | 7534235..7534463 | 757..983 | 905 | 97 | Plus |
3L | 28110227 | 3L | 7533355..7533445 | 9..99 | 455 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:26:51 has no hits.
FMO12585.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-30 10:55:16 Download gff for
FMO12585.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lqf-RD | 220..1214 | 1..991 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:12 Download gff for
FMO12585.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lqf-RF | 411..1404 | 1..991 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:32 Download gff for
FMO12585.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lqf-RF | 411..1404 | 1..991 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:32 Download gff for
FMO12585.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7533345..7533443 | 1..97 | 95 | -> | Plus |
3L | 7533507..7534165 | 98..756 | 100 | -> | Plus |
3L | 7534235..7534471 | 757..991 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:12 Download gff for
FMO12585.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7526445..7526543 | 1..97 | 95 | -> | Plus |
arm_3L | 7526607..7527265 | 98..756 | 100 | -> | Plus |
arm_3L | 7527335..7527571 | 757..991 | 96 | | Plus |