FMO12590.5prime Sequence
1106 bp (1002 high quality bases) assembled on 2012-10-30
> FMO12590.5prime
AGTCGACATGAATACCAAAAACATTGAAAACAAACCCATGGATGGGACCA
AATTTCTTGATATGTTGTCAAAAATATCATTGGAGGAAATATTACAACTT
GAATTCCGTAACAATCCAACTAGCAAATGGGAAACATTGGTAACCCCCTC
ATACCCGCTTCGGAAATACAATTGTAATATTTGCCGTGTTGTTCAGTTCG
GCGACAAAAATTTGTTTAGCCACCTTAGTGGTAAAAAACATATTGCCGTA
ATGAAACTCAAAGAGCAATTGCAAATAAGAAACAAGCCCAGTGTAGCTCC
ACCCACAAAAAAGGGCCCTAACACCAATGCGAATAATAACAAAAACAGTC
AATCTCCTGCTGTTAAAAATTTGCCAATTATAAACAAAAATGTACCAAAT
CAAAATAATAATGCAAACACTAACGTTGTTAAGCAGGCAGCTGGAAATGA
AGTTGCAAAAACACAGCCGACGCAAAATAAAAAACCTGCAATGGGCGGTA
AAACGAAAAGCACTGCTACCCCTAAGGTAGTAAATAATCCAAACACTCAA
AAAAATATTCAGAATAGCACAACAAACATTCAAAAGAATGTGCCAGAAAA
CAGTCCACCCAATCAAAAGAATACATCAGTAAATAATACGCCTGTTAAGA
AAAACACAGGGAATAATGCACCCGTACAAACGAGTGTTCCTATTATTGGC
GCAAACGCGAAGAAAAGACCTAACCCAAACCCGGGAAATATTCAAGCCAA
GAAAGCAAATGTGAATGCGGCCAACGCAAATAACACTGCTAATAAAAAGG
CTCCACAGTCTGCAATGAATACAGCGAAAACTTCACAGAATTCTGGAGGT
CCTGCTCCAAAAACTACTGTGAGCATACTACTTCTCAGCAGCAGTAATGT
TCAGATTGAAAGCAACCATTAGAGCAAACAAAGCCACTGTTCAAATTCCC
TCACAGACTCATCAAAGCACAGTCGACGAAGCTGTGCAGATGCTAAATCG
ATACGCGGACTTGGCTCGCAGCAACCGACTGATCAGAATATAAGTCAAAA
TCCGCTGCACGAAATTTCTTTGGTTCCGTTTAGCCAGGCTATAATCTCAA
CCCGAG
FMO12590.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:27:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31510-RA | 4289 | CG31510-RA | 478..1583 | 8..1098 | 4900 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:27:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25120002..25121029 | 1024..8 | 4595 | 98.7 | Minus |
Blast to na_te.dros performed 2014-11-28 18:27:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 617..897 | 327..629 | 112 | 53.9 | Plus |
FMO12590.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-30 10:55:20 Download gff for
FMO12590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31510-RA | 462..1520 | 1..1050 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:35 Download gff for
FMO12590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31510-RA | 473..1531 | 1..1050 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:52 Download gff for
FMO12590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31510-RA | 473..1531 | 1..1050 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:52 Download gff for
FMO12590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25120002..25121034 | 1..1024 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:35 Download gff for
FMO12590.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20945724..20946756 | 1..1024 | 98 | | Minus |
