FMO12595.5prime Sequence
1083 bp (937 high quality bases) assembled on 2012-10-30
> FMO12595.5prime
CGACATGGACGTGGCCAAAATGCAAGCCACTTCCGGTCAGCATCTGCTGC
ATCCGGCCGCACCGCCCGCCCACCAACACCACCTGCCCCTCGACTACAGC
CTGGGCAACTTTAAGCCAGCCATCGCGTCTGACTTTCCCGGACCCTTCCT
CACCAGCCAGCAATCCTCGTCGGCCTCCAATTCCGCCTCCTCCTCCGCCG
CCGCCACCGTTCCGCTGCAGGTGCGCGATCTCAGCGCGCTGACGGCCATG
GCCACGATACCCTCGCCCACCCAGCTGCTTCACCAGCGCATACAGATGTC
CGCGGACGCGGCCTTGGGCCACCACCAGCAGCAGCCGGCACAGAATCCCA
ATCCCAATCCGAATCACCCGCAGCCACAGATGCCGCCGGCCTCCACGTCG
CCGCACGAGTACGCGCCTATGTCCGCCTTCAAAGCGGTGCTGCCCAAGAA
GCGAAACTCCGACGATGCCTCGCTAGCATTTAGCATAAGCAGACTGGTCA
AGACTGAACAACTAACGGCGATGGCGGCGGCCGTTGGCCTTAAGCCGCCG
ACTCCTCTGGAGGACAACAACAACTCAATCTCGATGCTGAGCAAAAATCA
GCAGATGCACCAGCAGCACCACCAACAGTCGCATCTTGCCCAGCGCCCCA
AGCCAGCCTTTATCAGCGCCAGCGAAAAGCTGCGCCGCCAATCGCGATCC
CGCTCCAGGTCGAGATCCCGCAGTCCCTGCTCATCGCAAATCGACATGGA
GGATGCGGATTCGAACCACTCGCACCGTTCTCTGCACTCACGCTCGAGAT
CGCGATCACGTTCCCGCTCCATTCCCGCTCCCGCTCGCACTCGAGCAGCT
CATCCGTGGAACTGGAGGTGGACTCGCCGCTCAGGCAGTCCGCGCATCAG
CTCGCCCAGCGGCGCCTCAGCCTCAGCCTCCGAGCTCCTTATCATCCGCC
AATGGTTGGCGGTCGTAGCATAGGATCCAGAGTCGATCCTCTTCTTCGGT
TTCCGCGCTGCTGCGGCGAGACGATCGCCTCCCTATCGACGGTAAGCCAG
CATTCGCACTGGTACTCTGAATCCAACGGTCTG
FMO12595.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:27:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
sens-2-RB | 3744 | CG31632-RB | 667..1749 | 5..1083 | 4850 | 97.3 | Plus |
sens-2-RA | 3361 | CG31632-RA | 284..1366 | 5..1083 | 4850 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:27:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6831169..6831728 | 464..1024 | 2385 | 97.3 | Plus |
2L | 23513712 | 2L | 6822600..6823059 | 5..464 | 2300 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:27:42 has no hits.
FMO12595.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-30 10:55:21 Download gff for
FMO12595.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sens-2-RA | 280..1321 | 1..1042 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:44 Download gff for
FMO12595.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sens-2-RA | 280..1321 | 1..1042 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:02:00 Download gff for
FMO12595.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sens-2-RA | 280..1321 | 1..1042 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:02:00 Download gff for
FMO12595.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6822596..6823059 | 1..464 | 99 | -> | Plus |
2L | 6831170..6831747 | 465..1042 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:44 Download gff for
FMO12595.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6822596..6823059 | 1..464 | 99 | -> | Plus |
arm_2L | 6831170..6831747 | 465..1042 | 96 | | Plus |