Clone FMO12595 Report

Search the DGRC for FMO12595

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:125
Well:95
Vector:pMK33-CFH-BD
Associated Gene/Transcriptsens-2-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12595.5prime Sequence

1083 bp (937 high quality bases) assembled on 2012-10-30

> FMO12595.5prime
CGACATGGACGTGGCCAAAATGCAAGCCACTTCCGGTCAGCATCTGCTGC
ATCCGGCCGCACCGCCCGCCCACCAACACCACCTGCCCCTCGACTACAGC
CTGGGCAACTTTAAGCCAGCCATCGCGTCTGACTTTCCCGGACCCTTCCT
CACCAGCCAGCAATCCTCGTCGGCCTCCAATTCCGCCTCCTCCTCCGCCG
CCGCCACCGTTCCGCTGCAGGTGCGCGATCTCAGCGCGCTGACGGCCATG
GCCACGATACCCTCGCCCACCCAGCTGCTTCACCAGCGCATACAGATGTC
CGCGGACGCGGCCTTGGGCCACCACCAGCAGCAGCCGGCACAGAATCCCA
ATCCCAATCCGAATCACCCGCAGCCACAGATGCCGCCGGCCTCCACGTCG
CCGCACGAGTACGCGCCTATGTCCGCCTTCAAAGCGGTGCTGCCCAAGAA
GCGAAACTCCGACGATGCCTCGCTAGCATTTAGCATAAGCAGACTGGTCA
AGACTGAACAACTAACGGCGATGGCGGCGGCCGTTGGCCTTAAGCCGCCG
ACTCCTCTGGAGGACAACAACAACTCAATCTCGATGCTGAGCAAAAATCA
GCAGATGCACCAGCAGCACCACCAACAGTCGCATCTTGCCCAGCGCCCCA
AGCCAGCCTTTATCAGCGCCAGCGAAAAGCTGCGCCGCCAATCGCGATCC
CGCTCCAGGTCGAGATCCCGCAGTCCCTGCTCATCGCAAATCGACATGGA
GGATGCGGATTCGAACCACTCGCACCGTTCTCTGCACTCACGCTCGAGAT
CGCGATCACGTTCCCGCTCCATTCCCGCTCCCGCTCGCACTCGAGCAGCT
CATCCGTGGAACTGGAGGTGGACTCGCCGCTCAGGCAGTCCGCGCATCAG
CTCGCCCAGCGGCGCCTCAGCCTCAGCCTCCGAGCTCCTTATCATCCGCC
AATGGTTGGCGGTCGTAGCATAGGATCCAGAGTCGATCCTCTTCTTCGGT
TTCCGCGCTGCTGCGGCGAGACGATCGCCTCCCTATCGACGGTAAGCCAG
CATTCGCACTGGTACTCTGAATCCAACGGTCTG

FMO12595.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:27:43
Subject Length Description Subject Range Query Range Score Percent Strand
sens-2-RB 3744 CG31632-RB 667..1749 5..1083 4850 97.3 Plus
sens-2-RA 3361 CG31632-RA 284..1366 5..1083 4850 97.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:27:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6831169..6831728 464..1024 2385 97.3 Plus
2L 23513712 2L 6822600..6823059 5..464 2300 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:27:42 has no hits.

FMO12595.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-30 10:55:21 Download gff for FMO12595.5prime
Subject Subject Range Query Range Percent Splice Strand
sens-2-RA 280..1321 1..1042 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:44 Download gff for FMO12595.5prime
Subject Subject Range Query Range Percent Splice Strand
sens-2-RA 280..1321 1..1042 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:02:00 Download gff for FMO12595.5prime
Subject Subject Range Query Range Percent Splice Strand
sens-2-RA 280..1321 1..1042 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:02:00 Download gff for FMO12595.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6822596..6823059 1..464 99 -> Plus
2L 6831170..6831747 465..1042 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:44 Download gff for FMO12595.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6822596..6823059 1..464 99 -> Plus
arm_2L 6831170..6831747 465..1042 96   Plus