FMO12604.5prime Sequence
793 bp (793 high quality bases) assembled on 2013-01-17
> FMO12604.5prime
CAGTCGACATGAAAGTAGAGGCATTGGACAAATTCTGGGCTGACAAGAGC
CGCTACGATCTTGCCGAGAAGCGATTCTACGAGGGTCCCCAGAAGGTAAC
TGATCGCAGCCACTACAGCCCATTAGTAAGCGAAATCGCAAAGGCTAGGG
AACACATACAGAACTCGCTGGAAAAGATCGATGGCGTTACTCTGGACGAT
GGCTTAAATTCCGAGCTGGCCAAGCGTCTGGCCCAATTGGAGGGTGAACA
CAAGGAGTTGAAGACCCAGGTTTCCTTGTTGAACGAACTTTTGACTGCCA
CAGTGAAGCGCTTGGAAACTCAGCTGAAATTGACGAATGGAGTGTCGAAA
GAGCCCGAGGTCGAAGCGAAAAAACCAGAAGCGAACGACGACGATGACGA
TGTGGATCTATTTGGATCGGACAGCGAGGAGGAGGATGGAGAGGCCGCCC
GCATAAGGGAGGAAAGGCTGGCAGCCTATGCTGCCAAGAAGGCCAAGAAA
GTTCAAATTATTGCCAAGTCGAACATCATTCTGGATGTTAAGCCGTGGGA
CGATGAGACCGATCTGAAGGTTATGGAGACGGAAATCCGCAAAATCACCC
AGGACGGTCTACTGTGGGGAGCTTCCAGATTCGTGCCAGTTGCCTTTGGC
ATTCAGAAACTGAGCATTTCATGCGTGGTTGAGGATGATAAGGTTTCCAT
CGATTGTCTGACTGATTAGATCGAGAAACTGGATGACTTTGTCCAAAGTG
TTGACATCGCTGCGTTCAACAAATCGCAAGCTTTCTAGACCAT
FMO12604.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:25:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eEF1delta-RB | 928 | CG4912-RB | 67..831 | 9..773 | 3750 | 99.3 | Plus |
eEF1delta-RA | 847 | CG4912-RA | 151..750 | 174..773 | 2925 | 99.2 | Plus |
eEF1delta-RA | 847 | CG4912-RA | 67..153 | 9..95 | 435 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:25:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10233755..10234353 | 175..773 | 2920 | 99.2 | Plus |
2L | 23513712 | 2L | 10232573..10232663 | 9..99 | 455 | 100 | Plus |
2L | 23513712 | 2L | 10233478..10233561 | 93..176 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:25:38 has no hits.
FMO12604.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:47 Download gff for
FMO12604.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eEF1delta-RB | 81..852 | 9..780 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:55:06 Download gff for
FMO12604.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eEF1delta-RB | 67..838 | 9..780 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:46 Download gff for
FMO12604.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eEF1delta-RB | 67..838 | 9..780 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:46 Download gff for
FMO12604.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10232573..10232659 | 9..95 | 100 | -> | Plus |
2L | 10233481..10233561 | 96..176 | 100 | -> | Plus |
2L | 10233757..10234360 | 177..780 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:06 Download gff for
FMO12604.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10232573..10232659 | 9..95 | 100 | -> | Plus |
arm_2L | 10233481..10233561 | 96..176 | 100 | -> | Plus |
arm_2L | 10233757..10234360 | 177..780 | 98 | | Plus |