FMO12605.5prime Sequence
332 bp (332 high quality bases) assembled on 2013-01-17
> FMO12605.5prime
CAGTCGACATGGCCAACTTCAGTCAGCTAAGAATCACCATTGGATTTTGT
GTGATTTTGGCCGTTATCCTGGAACAACCATTCACTGCAGAGGCGGTTGT
TCGAGATGCATGCCAGACGGCGCCGAATAAGAGTGTGTGGCTATGTAGCC
CATCTACCCTGGGCATATTTTTCGATCCGGAGACACAACGTTGTCGCTAC
ATGGGATGCAGTAATCGAAAGCTGTTCTTAACCCTTGAAGACTGCGAAAA
GATTTGCAACAATCCGCGGCACATCAAGCGACGCAACCAAGCAAAGGCCA
ATGAAACATCACATGCAAGCTTTCTAGACCAT
FMO12605.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:25:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31778-RB | 918 | CG31778-RB | 516..821 | 9..314 | 1530 | 100 | Plus |
| CG31778-RA | 1137 | CG31778-RA | 516..821 | 9..314 | 1530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:25:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3704422..3704633 | 314..103 | 1060 | 100 | Minus |
| 2L | 23513712 | 2L | 3704879..3704973 | 103..9 | 475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:25:44 has no hits.
FMO12605.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:48 Download gff for
FMO12605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31778-RA | 482..799 | 1..318 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:55:10 Download gff for
FMO12605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31778-RA | 508..825 | 1..318 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:50 Download gff for
FMO12605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31778-RA | 508..825 | 1..318 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:50 Download gff for
FMO12605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3704423..3704633 | 103..313 | 100 | <- | Minus |
| 2L | 3704880..3704979 | 1..102 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:10 Download gff for
FMO12605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3704423..3704633 | 103..313 | 100 | <- | Minus |
| arm_2L | 3704880..3704979 | 1..102 | 96 | | Minus |
