FMO12610.5prime Sequence
965 bp (872 high quality bases) assembled on 2013-01-17
> FMO12610.5prime
CAGTCGACATGCGCAGTGGGCTAACGGTTCGTCCAATGCTGGTGGTGCTT
CTAGTGGGTCACCTAGTGGATCCAGTGGCGCCGGCTAACCTACTGACTAG
CTATCTGCCCGCCTCCATGCAGGCCTTGGCATACTATATTGACCTGCTGC
AGTACGAGCCACTATCAAGCACAACAGTGGAGCCTCCTTTCAGTGCGGAT
GAAGAAGGTATGGAATCCACCACTGCAAATCCGCGCCCATCCACACCGTT
GCCCACGAGGATGAGAACCACTACCACAAGGCGACCGATTGGAGCAGGTG
CGTCTGGATCTGGTGGCATGGGCTGGTGGCAGCCGCCAAGTTGGTGGGAA
ACGCCGAAGAGATCATCCACAACCGAGAGACCCACATCGCCACCCACTGT
GCCGCACCGTCCGGCAATTTTTGCACCAACTGCGCCGCCGGAAAAGTCCC
TTGAGGGCAACGATCTATTTGCAGAAATCAAAGATGATAGCGACTTTGAT
ACCCTGCCTTTGTCTTTGATCCGTGATATTCAAAGCGAGCGCTACGACTT
TACCAACGATGTGGAGTCACTGGATAACTTTTTGCGCCTCTACGACGATA
ACTACGGAAGGGCCGCTTTCGGTTCTGAGTCCGCGATGGATCGATGGAGC
ACCGCCTCGATCGCAGGCAAAAAGAGAGTTCCTCCCACTAAGCCCTATGT
GGATTTCCTGCTGGTTTACGATCTGCTAAAGCGCGATGCTAAGGCGGCGA
GTCTGAGCAAGTACGAGGGATATTCCGAGAATCTGCTGGTGAGCTGCATC
CTTGTCACAGGTTTCGGCGGCCAGGCAATTTGTATTACTTCTATTTAAAG
GATGTTTGGACCGGGGCGATATCCGCGCAATGGACGTGGGTGCCGCGTTG
CAGGATATCGCCAAAAGATCTTGGGGATTCCAAAGGCTGACTTCAAGGAA
TTGACTTTTATTTCT
FMO12610.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:25:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE3-RB | 1094 | CG2723-RB | 66..1019 | 9..962 | 4275 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:25:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8028658..8029481 | 830..9 | 4020 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:25:14 has no hits.
FMO12610.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:45 Download gff for
FMO12610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RA | 959..1829 | 1..874 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:52 Download gff for
FMO12610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RB | 60..930 | 1..874 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:16:33 Download gff for
FMO12610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE3-RB | 60..930 | 1..874 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:16:33 Download gff for
FMO12610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8028617..8029487 | 1..874 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:52 Download gff for
FMO12610.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3854339..3855209 | 1..874 | 98 | | Minus |
