FMO12614.5prime Sequence
969 bp (892 high quality bases) assembled on 2013-01-17
> FMO12614.5prime
CAGTCGACATGACTGCCAACGGGAACGGAACTGCTCAGGATTTGGGTGCC
GGCATTGAAATCGTGGCCCCACAGAAGCTCCAGCCGGAATCCAAGGTTTA
CGGGCGCGTGCAGCAATTGACCGCATTTTTCAAACAACAATTCGGAGCGA
ATCCGGACTTTATCGTTCGAGTGCCAGGAAGGGTCAACATCATTGGCGAG
CATGTGGACTACTGCGGCTATTCGGTGCTGCCCATGGCTGTAAGCCAGAG
CATTTTCCTTGCAGTGGCCAAGAATCCTAGTGATAGCCAGCTTCAACTCA
GAAATCTCGAGGAAGCGAAGTTTACGGGCTACGATGCCGATCTCAAAACG
CTCAGAATCGAGCTTCCAAAGAGTGGTGGACCCGCTTGGTATAACTACTT
CTTGTGCGGCATCAAAGGAATACAGGAGAGTCTGGGCAGCCAGTGGAAGC
CCATTGGCATGCGCATTGCTGTGGACGGTAATGTGCCCTTGGCGGCAGGA
CTCTCCAGTTCGAGTGCCATGGTCAGCTCCGCTGTGTTGGCCACCGCACA
CGTCCAGGGCAAGAAACTAGATCGCAGGGAGCTGGCTTCCATTTCGGCCA
TGTGTGAGCAGTACATTGGAACGCACAGTGGTGGTATGGATCAGGCAATA
GCCTATTTGGGCAGAGTTGGCTGCGCCCACCACATCGAGTTCCATCCCAA
GCTCAAGGGCACTCCGGTGACCTTGCCAGCGGGCAAGTGCTTCGTTGTGG
CCAACAGTCTGGCTCAAAAGAACAAGGCTGCTTCGTCGGACTACATGACG
AGTGGTGGAATGCCGATTGGCACTAGATGGCTGGCCAAGCGCAAGGGCTT
GATCAACTGGGAGATATTGTGCGCTTCATTGGATCTGCAGGAAGGCGTGC
CAAATGGAATATGGAACTTTTCATAGTTTGGATTACGGACAACTTACCAA
AAGACACTATCCCGCGGCC
FMO12614.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:26:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Galk-RD | 2035 | CG5288-RD | 428..1368 | 7..946 | 4365 | 98 | Plus |
Galk-RB | 2053 | CG5288-RB | 446..1386 | 7..946 | 4365 | 98 | Plus |
Galk-RA | 2669 | CG5288-RA | 120..1060 | 7..946 | 4365 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:26:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8984113..8984669 | 908..354 | 2470 | 98.2 | Minus |
3L | 28110227 | 3L | 8984813..8984988 | 355..180 | 880 | 100 | Minus |
3L | 28110227 | 3L | 8985052..8985227 | 182..7 | 880 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:26:44 has no hits.
FMO12614.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:53 Download gff for
FMO12614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5288-RB | 437..1359 | 1..920 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:55:46 Download gff for
FMO12614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galk-RA | 114..1035 | 1..920 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:17 Download gff for
FMO12614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Galk-RA | 114..1035 | 1..920 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:17 Download gff for
FMO12614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8984074..8984667 | 356..947 | 96 | <- | Minus |
3L | 8984813..8984986 | 182..355 | 100 | <- | Minus |
3L | 8985053..8985234 | 1..181 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:46 Download gff for
FMO12614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8977174..8977767 | 356..947 | 96 | <- | Minus |
arm_3L | 8977913..8978086 | 182..355 | 100 | <- | Minus |
arm_3L | 8978153..8978334 | 1..181 | 98 | | Minus |