FMO12618.5prime Sequence
998 bp (910 high quality bases) assembled on 2013-01-17
> FMO12618.5prime
CAGTCGACATGAGCAACATAAACGTAAACACAGTGCCCAGGTCGAGTCCA
AATGCCAATGGGAATCCAAATGCGAATCCAAATCGCAGTGTGGCCTCCGA
GGAGGAGGAGGGCGATGGCCGGATGAGCGACAGCGGGAGCAACTCGGCCA
GCAGCCAGCTGAGTCGCACGTCGAGCAGCAGCTCCTCGGACTCGGCGAGT
GGTTCACTGGAGGATGACCCGGATGGCGAGGACGAGGATATGTCCGCCCA
GGACGCGGGCAGCGCCTCGGAAACGGAAGACGACACCTCCACCTGCCAGT
CGGATGAACTGGAGCTGGCGCAGCTCACTGGTCGGGATATCTTTCGGTTG
CCGCGCGGCTTGTGCGAAAATGCAGCTATTTTTCATGAATTCTTCTCTCT
TGAGACCTGGCAACAGCTGCCCCATCACCTCCAGGCCCGACTACAGCCGA
TGCTTCCGGACTTCTCCCGTTTGGTATCCGGACAGGCACAGGCCTGTGCG
GAACAGCAACGTACACTGGTGCAGCTATTTAATGGCGGTCTACAGCGTTT
CGGGCAATCACCACTGCTTCAGCTACAACGCCAACTTGAGGAAGGAAACC
TGCGTCCCGATGTCCTTCAGTTGCGGAGGAGCATACAGCATTCGGGCAGA
AGGGAATTTCGTTTCCAGCAGCTGAGCGCCTAAGTCTGCTAGCCAAGGAG
CTCTTTATGTCAAGGGAACAGCTACTCCAGCATGCCTACACCTCTGCTCC
ACCTTCTGATGGTGCTTTTGGTAAAAATCTGCCAAGGCCACGTTCCCGTA
GAGAAAGCCGCCCACACTGTCGATAGAGAACAAATTTTGTTCGCAGCGTG
CCAGAAACGCTATGCCCAGAGCTTCTGGAACTAATAGCTCGCTAGAGGCG
AAACCCGGCGAAATCATTGCGGAGGAGGAGGAGAGACGAGGGATGCCGAC
AGCTTATTGAACGTTGGCCAAAGGCCCTGAATTCCAATTGGAAGAGAA
FMO12618.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:26:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11970-RB | 5607 | CG11970-RB | 380..1379 | 9..997 | 4625 | 98.1 | Plus |
| CG11970-RA | 5397 | CG11970-RA | 170..1169 | 9..997 | 4625 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:26:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8985097..8986073 | 9..977 | 4415 | 98.5 | Plus |
Blast to na_te.dros performed 2014-11-28 18:26:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| jockey2 | 3428 | jockey2 JOCKEY2 3428bp | 600..674 | 909..983 | 114 | 64.9 | Plus |
FMO12618.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:54 Download gff for
FMO12618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11970-RA | 164..1152 | 5..984 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:55:53 Download gff for
FMO12618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11970-RA | 168..1156 | 5..984 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:24 Download gff for
FMO12618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11970-RA | 168..1156 | 5..984 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:24 Download gff for
FMO12618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8985095..8986083 | 5..984 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:53 Download gff for
FMO12618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4810817..4811805 | 5..984 | 98 | | Plus |
