FMO12625.5prime Sequence
1029 bp (937 high quality bases) assembled on 2013-01-17
> FMO12625.5prime
CAGTCGACATGCTGGCCAGCGAGAACTTTCCCACACATCACTTCAAGGAA
TCTATATTTAAGCCGTACAGTACGACGAGTGGCGATGATTTGGCAAGCGT
TAGCCCATTGACAGCGACGGCAGCGTTGGTGGCGTCCACGTCGTCACCGG
CTGATTCCACCTCCACAGTTGCATTCGAGCAGGCCAGCAAAATGTTGGCC
AACGCCGCCAACAATAATAATAATAATAATAACAACATCACGAGCACCAA
GGATGATCTATCCAGCTTTGTGGCCAGCCATCCGGCGGCAGAGTTCGAGG
GCTTCATCCGCGCTTGCGTCGACGAGATCATCAAGCTGGCCGTCTTCCAG
GGCACCAATCGCTCCTCGAAGGTCGTCGAGTGGCACGAGCCAGCTGAGCT
GCGACAGCTCTTTGACTTCCAGCTGCGGGAGCAGGGCGAATCGCAGGACA
AGCTGCGCGAGCTGCTGCGGGAAACGATTCGATTCTCCGTGAAGACAGGA
CATCCGTACTTCATCAATCAGTTGTACTCGGGTGTGGATCCATACGCGCT
GGTAGGTCAATGGCTCACCGATGCCCTCAATCCCAGCGTGTACACGTACG
AGGTGGCTCCACTCTTTACGCTGATGGAGGAGCAGGTGTTGGCCGAGATG
CGACGCATTGTGGGCTTCCCCAATGGCGGCCAGGGTGATGGCATCTTCTG
TCCCGGCGGCTCGATAGCCAACGGTTATGCAATCAGCTGCGCCCGCTACA
GACACTCGCCCGAGTCCAAGAAAAACGGACTCTTTAATGCCAAGCCGCTG
ATTATCTTCACCTCGGAGGACGCGCACTACTCCGTGGAGAAGCTGGCCAT
GTCCATGGGCTTCGGCAGCGATCATGTGCGCAGATAGCCCACCAACGAGG
TGGGCAGATGCGGCTGATCGACTGAGAAACCGGGTGAAGCTGTGCCTGGA
AACGCTGCAGCCGCTGATGTATCGCCACAGCGGGTACACTGTGCTGGCAG
TCCTTCATAGATTTGTGCGTGATTCTTCG
FMO12625.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:27:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| b-RC | 2026 | CG7811-RC | 140..1136 | 9..997 | 4650 | 98.5 | Plus |
| b-RB | 2135 | CG7811-RB | 140..1136 | 9..997 | 4650 | 98.5 | Plus |
| b-RA | 2026 | CG7811-RA | 140..1136 | 9..997 | 4650 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:27:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13821387..13822148 | 9..770 | 3810 | 100 | Plus |
| 2L | 23513712 | 2L | 13822680..13822863 | 769..950 | 625 | 91.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:27:35 has no hits.
FMO12625.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:57 Download gff for
FMO12625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| b-RA | 178..1189 | 1..1006 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:56:18 Download gff for
FMO12625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| b-RA | 133..1144 | 1..1006 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:46 Download gff for
FMO12625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| b-RA | 133..1144 | 1..1006 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:46 Download gff for
FMO12625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13822682..13822924 | 771..1006 | 92 | | Plus |
| 2L | 13821380..13822148 | 1..770 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:56:18 Download gff for
FMO12625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13822682..13822924 | 771..1006 | 92 | | Plus |
| arm_2L | 13821380..13822148 | 1..770 | 99 | -> | Plus |
