Clone FMO12626 Report

Search the DGRC for FMO12626

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:126
Well:26
Vector:pMK33-CFH-BD
Associated Gene/Transcripthkl-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12626.5prime Sequence

985 bp (855 high quality bases) assembled on 2013-01-17

> FMO12626.5prime
CAGTCGACATGAGACGTCGCAGCGAGTTTCCAGCGATTTTCGGACAGCCA
TGAGACGTCGCAGCGAGCGAAAAAAGTCGTCGTCGCCCGCTCCGGTGCCG
GTGGCAGTTGCACGGAGAAGTCGCCGCTCCCGCAAGGTGTCGGAGAACGA
GAAGACCGAGGTCGAGACTCCGGTCGTGGCCCAAAATAATGAGGCCGAAT
GCCCCAAAGTACCGCCAGCCTCTCAAGAAATCAATGAGGCGCGGGCATCC
AGTGAAGAACGTGCCGGATCTGGAGCATCGCCAGTGCGCAGGAGTCGCGG
CAGCCGGACGACGCCTAGAAAGCGCACGGAGTCCAAGGGCGGCGACAAGA
AGGTGGACACCATACCCGAGGAGGAGCCGGAGAATGGAAAGGATGTTGAA
AAGGACGCTGTCGAGGAGGAAAATACTGTAGCGCCACCCGCGGCTAATGA
GAGCGAGTCCGAGGACCGTGCCAAGACGGAGGATCAGCAGGCTCAAGACG
ATGAATCCTGTGCTGAACCCGCTGTAGTCAAGGATGATGATGTTGAGAAA
GAGGACTTAAAACCGCAGCAGGAGGTCCCCACTTCCACTGATGATGACAC
CAAGCAGAGCGAGCCAGAACAAGAGGTAAAGGTTCCTTCTCCTTCCAGCA
AGGATGAGGAACATCTAAAAACGACTAGTGATGTATTAGACATTCAGACA
GAAGAGGTCGATGAAAGGGACGAAGAGCCTCCGCTCCTGCGGAGCGCAGA
GAAACCAAGAGAGGCACAAGGAGCAGATAAGGAACAGCACCCGCAGAGGA
GGAGGACACAGGAAACCACAAGCAGATAGACGAACCCAGACCAATTTCAC
GATGAACCAGTATATCTTTCGAACGACAAGTATCGATTTCATGTCTTAAA
CAGCAGCGCACCAACACAACGGGTGCTCCGGTCTGCACAACACGGTCGGT
GGGCGAAGCGAATATGGGTTGATAACAAAAAGTCT

FMO12626.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:27:41
Subject Length Description Subject Range Query Range Score Percent Strand
Acn-RC 3153 CG10473-RC 178..1157 15..985 4265 96.8 Plus
Acn-RB 2513 CG10473-RB 178..1157 15..985 4265 96.8 Plus
Acn-RA 2884 CG10473-RA 93..1072 15..985 4265 96.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:27:38
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19045532..19046453 15..929 3915 97.4 Plus
Blast to na_te.dros performed on 2014-11-28 18:27:40 has no hits.

FMO12626.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:58 Download gff for FMO12626.5prime
Subject Subject Range Query Range Percent Splice Strand
hkl-RB 170..1151 12..985 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:56:20 Download gff for FMO12626.5prime
Subject Subject Range Query Range Percent Splice Strand
Acn-RA 91..1072 12..985 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:46 Download gff for FMO12626.5prime
Subject Subject Range Query Range Percent Splice Strand
Acn-RA 91..1072 12..985 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:46 Download gff for FMO12626.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19045530..19046511 12..985 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:56:20 Download gff for FMO12626.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19045530..19046511 12..985 96   Plus