FMO12627.5prime Sequence
905 bp (899 high quality bases) assembled on 2013-01-17
> FMO12627.5prime
CAGTCGACATGGCCAAAATGGAGGTCGACGATGTGGTCGACTTGAGTTTG
GGGTCCGGTCGTGACCCGGCGTTGACCATAACGCCGGCTCCGCCGCCGGC
GGCGCTCAGTAATCGGGATCTGCGTGCGCTGACAGCCAACAATGCTGGCC
TGACCATCACTCCGTCAGCATCGCCGGCGACCAATAATGGCACCACCTCC
AATAGCAGTAACACAAACTCCAACAGCAGCAGCACCACCACCACCACCAA
CAACAACAACAACAGTAGCAGTAACACCAATAGCTCCAGCGCAAACAACA
ATAACAACAACAACAGCATTAACGCCAGTGATGGTGTCACAGGTGCGACA
AGTGGATCCATAGGCGGCGGTCAGGATGAGAACAAGGTTCAGCGGAGAGT
ACTGCGACCACGAACCGAACCCAAATCCTATGCCGAGGCCCCAGACATTG
TGTTACTACCCGCTCGCACAAATGGCCGTCAGCAGAATGGAAACATCGAT
TCGGAGACGGATGACGAGGAGATGCCCCCGTATGTGCCCATCAAGGAGCT
GAGCCATGCAGAGCTCAAGGAGCGCGAGAAGAGTCTGAGGAAGCTGCGGC
AGGATCTGCGCAATGAGGAGACCAAACTGATGCTGCTCAAGAAACTCAAG
CAGTCGCAGCAGGTGATGAATGAGAATCTGGTGGTGACGCCGACCAGCGT
ATCGCCCAACAATCCGCTATCGGCGATACCCGCCGCTCTCACCTCGAAGG
GATCGCTGAGTGTGACGCCCACGTCGGCGGTACCCCTGCCCGCCCACAGC
AAGGGCAGCAGGAGCAGTTTGAGCGGCAGCGGCGGAACTGGCAGTGAGCT
TTAGCGCCACCAACAGTCGAACGGGCAGCTCGGAAGTCAGGGGGGGGGGT
TGTTT
FMO12627.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:27:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| simj-RE | 5110 | CG32067-RE | 673..1545 | 9..882 | 4285 | 99.4 | Plus |
| simj-RD | 3640 | CG32067-RD | 673..1545 | 9..882 | 4285 | 99.4 | Plus |
| simj-RC | 3604 | CG32067-RC | 673..1545 | 9..882 | 4285 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:27:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10685050..10685877 | 9..836 | 4125 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:27:43 has no hits.
FMO12627.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:59 Download gff for
FMO12627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| simj-RB | 419..1313 | 1..896 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:56:22 Download gff for
FMO12627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| simj-RC | 664..1558 | 1..896 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:48 Download gff for
FMO12627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| simj-RC | 664..1558 | 1..896 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:48 Download gff for
FMO12627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10685041..10685894 | 1..854 | 98 | -> | Plus |
| 3L | 10685964..10685992 | 855..884 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:56:22 Download gff for
FMO12627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10678141..10678994 | 1..854 | 98 | -> | Plus |
| arm_3L | 10679064..10679092 | 855..884 | 96 | -> | Plus |
