FMO12628.5prime Sequence
987 bp (876 high quality bases) assembled on 2013-01-17
> FMO12628.5prime
CAGTCGACATGGAGGGCATGGATCTGTGGACGTCGATGTTCTCGTCCGAC
TTCGAGGAGGGTGAGGCGGAGAGCGGGGTGGCGGAACTGGAGGACAGCGA
GCAGTACGGGAATGGCAATGATGACTTCCTAGGCGATACGGCGATCCTTG
ATTCAGGCGATGCCATCGATGACCTGCTGGATGCCGAAGAGGATGAGAGG
GAGGAGGAGGATGATTACGAAAAGAACTCCAAGGAGCCAAAGCAACCAGA
TCCCGACGATGATGCGCTCTTTGATTTTAATATGGAACCTATTGTAGATA
TAGCGGAGCCACAGCGTCCATCGTTGGCTCCTGCTGGACCCATGAGCCAA
CAAGTGCGTCCGCCAATGCAGCGACACTCATTCCCGGGAGCTGGGGGTCG
ACCCAGATTGGGTTCCGGACTGTCTGTACGACCCACCACCTCGCAGATCA
ATGCAACGGACGAGAACGGAGTGCCAATTAACTATGAGTTGGGCGTAGTC
TACATCTGCCCCGCCTGCGGTGGTGAATTCCGGCAACAGGACCACTGGAA
GCGGCACATGAACCACATTCACAAATACAACACTCTACGTGGCTTGAACT
TTACGCCGCTGGACAAGCTCTATCAGCGGTGCAGGGAGTGCAACAAGCGG
ATTGCCATGCACAGCCGGGAAAACCTGCTTAAGCATAAGTTCACGCACCT
GCCCTTCAGGTGCACCAAGTGCTACATCTGCAAACGGGAGTACAAATACA
GGCAAGATCTTATGGTTCATCTTCGCATGGTCCATTGCGATGAAGTCGTG
ACCATGATGCGGGAAGGTTTACAATGCGGCGGGGCGGAATACAACGGGTT
CGAGAGTCTCGCACCGAGCAGCTGCTGCGGAAAAAAACTTCCCGAGAAGA
ATGATGACCTTGGGGGAGGAAATCTGATCGCACAAAGAGTTCGAAAAGAC
CGTCTCCGACACCGGATGCCCTATTAGTACTTGTCTC
FMO12628.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:27:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6791-RA | 3770 | CG6791-RA | 337..1290 | 9..970 | 4370 | 97.6 | Plus |
CG6791-RB | 4338 | CG6791-RB | 337..1290 | 9..970 | 4370 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:27:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11589067..11589810 | 752..9 | 3720 | 100 | Minus |
3R | 32079331 | 3R | 11588853..11589015 | 915..750 | 545 | 92.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:27:52 has no hits.
FMO12628.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:59 Download gff for
FMO12628.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6791-RB | 333..1267 | 9..949 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:56:26 Download gff for
FMO12628.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6791-RB | 337..1271 | 9..949 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:52 Download gff for
FMO12628.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6791-RB | 337..1271 | 9..949 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:52 Download gff for
FMO12628.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11589068..11589810 | 9..751 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:56:26 Download gff for
FMO12628.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7414790..7415532 | 9..751 | 100 | | Minus |