FMO12629.5prime Sequence
1009 bp (903 high quality bases) assembled on 2013-01-17
> FMO12629.5prime
CAGTCGACATGTCGCAGGACAGAATCGCCGGCATCGATGTGGCAACCAAT
TCCACTGATATATCGAATATCATTAACGAGATGATCATCTGCATCAAGGG
CAAGCAGATGCCCGAAGTTCACGAAAAAGCAATGGATCATTTAAGCAAAA
TGATTGCCGCCAATAGTCGGGTCATTCGGGACTCAAATATGTTGACTGAG
CGCGAATGTGTCCAGAAGATAATGAAACTGCTGAGCGCCCGGAATAAGAA
GGAGGAGGGCAAAACTGTGTCGGATCACTTCAATGAGCTGTACAGGAAAC
TCACGTTGACCAAGTGCGATCCGCACATGAGGCACTCGCTAATGACCCAT
CTACTTACGATGACCGACAATTCGGATGCCGAAAAGGCAGTTGCCAGCGA
AGATCCACGTACTCAGTGCGATAATCTCACTCAGATTCTGGTCAGTCGTC
TTAACTCAATAAGTTCCTCCATAGCCAGTCTGAATGAGATGGGAGTGGTC
AACGGAAATGGAGTAGGAGCAGCAGCGGTAACAGGAGCAGCAGCGGTAAC
AGGAGCAGCAGCGGTAACAGGAGCAGCAGCGGTAACAGGAGCAGCAGCAA
GCCACAGTTATGATGCCACACAGTCCAGCATCGGATTGAGAAAACAGTCC
TTGCCCAACTACCTGGATGCAACAAAGATGTTGCCCGAGTCTCGACATGA
TATAGTGATGAGTGCCATTTACTCCTTCACCGGCGTTCAAGGAAGTATTT
GAAGAAGATGTGGTAACGGGCCGTTTCAAGCTGGATCAGCAGACATCAAG
TTCCTGACCACCGGCCAAGCGGGCATGTTGCTGCGGCTCTCCGAACTTGC
TACTACACGATCGAGTGGCCCAGTTTTCGGATGTATCGACCGGTTTCAAT
GCCATCGGCAGCATGGGCAGCCCTGAATTCCAAACTCAGGAGGGCTGGGC
AATTTCACGGCATTGCCATGCTTCACGATGAAATTGCACGTTTCGCAAGC
TCGTGATTG
FMO12629.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:28:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Grip91-RA | 3571 | CG10988-RA | 286..1274 | 9..984 | 4495 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:27:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13742913..13743735 | 938..123 | 3725 | 98.5 | Minus |
| X | 23542271 | X | 13744284..13744398 | 123..9 | 560 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:27:59 has no hits.
FMO12629.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:08:00 Download gff for
FMO12629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)dd4-RA | 254..1264 | 1..1000 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:56:31 Download gff for
FMO12629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)dd4-RA | 282..1292 | 1..1000 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:55 Download gff for
FMO12629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Grip91-RA | 282..1292 | 1..1000 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:55 Download gff for
FMO12629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13742843..13743734 | 124..1000 | 97 | <- | Minus |
| X | 13744284..13744402 | 1..123 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:56:31 Download gff for
FMO12629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13636876..13637767 | 124..1000 | 97 | <- | Minus |
| arm_X | 13638317..13638435 | 1..123 | 95 | | Minus |
