FMO12632.5prime Sequence
793 bp (776 high quality bases) assembled on 2013-01-17
> FMO12632.5prime
CAGTCGACATGAGGAAGCCAGAAATGCTGATTAGTTTAATTTTATGGTGC
CTTTGCGCTTCCAGTCTGACACTCCGTATCCCCGAGGACCTTGAGAATGC
CGCCATCAATGCCCTGAGCTCCGAACGTGCCCGTTCCCTGACCCCTTGTG
GATCCTCCGCGGAGGCAGAGGGCAGTGTGGCCGGTGACTATGACGTTTGC
CCGCCGAGCAAGTACCGCCAGCCAACAGCTGAGTGCAACAACGTCTCCCA
CCGAAAGTGGGGTGCCCGGGGAGATATCTTCCAGCGTCTGCTGGCTGCTG
ATTATGCCGATGGTGTGAGCCAGCCGAGGACCTCCAAGGGAACCCATGCT
CTACCCGATGCCGAGGTGGTGATCGAGCAACTGCAGCGCCATGTGGAAGG
CGAGCTGCGCCACGCGCACATCACTGCCATGCTGCCCGCCTGGTGTCAAC
TGTTGGCCAATGACCTAGTCGAGGTAGGACAGCTTCCCATCTCCGGAAAG
TGCTGCGAGCGCGACTCCGCCGTCAAGGATCCCAGCGAGCTGCAGCACTG
CTTCGTACGGGCGGGACCCGACTGCAAGGAGTACAAGCGATCGGCACCAG
GATTCGATTTGGAGGCGTGTCAGAAAGCACACTCGCCAGCAGATGAACAT
TGCCTCGGCCTACATTGATGGCTCTGGACTGTATGGCTCCACGCGCCATG
AATTCGACCAGTTGCGCACCTACATCAGAGGGTGGTGTAAAGGTGGAGTC
CTGCCAGTACTGTTAAGTGGCTGGAACCACCGGAGCACTGCAT
FMO12632.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:28:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10211-RB | 5187 | CG10211-RB | 694..1477 | 8..793 | 3775 | 98.9 | Plus |
| CG10211-RA | 5000 | CG10211-RA | 694..1477 | 8..793 | 3775 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:28:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18526865..18527444 | 46..625 | 2885 | 99.8 | Plus |
| 2L | 23513712 | 2L | 18527514..18527677 | 629..793 | 685 | 95.8 | Plus |
| 2L | 23513712 | 2L | 18518180..18518221 | 8..49 | 210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:28:11 has no hits.
FMO12632.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:08:01 Download gff for
FMO12632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10211-RA | 682..1471 | 1..793 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:56:38 Download gff for
FMO12632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10211-RA | 688..1477 | 1..793 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:02 Download gff for
FMO12632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10211-RA | 688..1477 | 1..793 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:18:02 Download gff for
FMO12632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18518174..18518218 | 1..46 | 91 | -> | Plus |
| 2L | 18526866..18527446 | 47..628 | 99 | -> | Plus |
| 2L | 18527514..18527677 | 629..793 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:56:38 Download gff for
FMO12632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18518174..18518218 | 1..46 | 91 | -> | Plus |
| arm_2L | 18526866..18527446 | 47..628 | 99 | -> | Plus |
| arm_2L | 18527514..18527677 | 629..793 | 95 | | Plus |
