Clone FMO12636 Report

Search the DGRC for FMO12636

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:126
Well:36
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12636.5prime Sequence

845 bp (825 high quality bases) assembled on 2013-01-17

> FMO12636.5prime
CAGTCGACATGATTGATCCAATCACCATGAAAGTGTTCGTTGTACTGGCT
CTGGCTTTGGCCGCTGTCTCCGCCGAGACTGTCCAGCAGGTTCATCCCAA
GGACCTGCCCAAGGACACCAAGATCAATGGCCGCATTGTGAACGGATATC
CAGCCTACGAGGGCAAGGCTCCCTACACCGTGGGTCTGGGCTTCAGCGGC
AACGGCGGCTGGTGGTGCGGTGGTTCTATCATCGCCCACGATTGGGTCCT
GACTGCTGCTCACTGCACCAACGGCGCCTCCCAGGTGACCATCTACTACG
GAGCCACCTGGCGCACCAACGCCCAGTTCACCCACACCGTCGGCAGCGGC
GACTTCATCCAGAACCACAACTGGCCCAACCAGAACGGCAACGACATCGC
CTTGATCCGCACCCCCCACGTGGACTTCTGGCACATGGTTAACAAGGTGG
AGCTGCCCAGCTTCAACGATCGCTACAACATGTACGACAACTATTGGGCC
GTCGCCTGCGGTTGGGGACTGACCACCGCCGGATCCCAGCCCGATTGGAT
GGAGTGCGTCGACCTGCAGATCATTAGCAACTCGGAATGCTCCCGCACCT
ACGGCACCCAGCCCGATGGCATCCTCTGTGTGTCCACCTCCGGCAGAAAG
TCCACCTGCTCCGGTGACTCCGGTGGCCCCCTGGTTCTCCACGAACGGTG
ACCGCCTGGTGAGTGTCACCTCCTGGGTTTCCGGCAACGGGTGCACCGCT
GGCCTGCCCTCCGGATTCCCCCGTGTTAACCACCCACTGGGACTGCATCC
GCCACCACTTCCGGCGTTGCTTACTACCGAAGCTTATCTAAACAT

FMO12636.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:27:30
Subject Length Description Subject Range Query Range Score Percent Strand
Jon25Bi-RB 866 CG8867-RB 6..819 11..827 3830 98.3 Plus
Jon25Biii-RA 827 CG8871-RA 92..544 99..572 735 78.5 Plus
Jon99Ciii-RB 1240 CG31362-RB 138..476 141..476 655 79.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:27:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4954326..4955139 827..11 3755 98.2 Minus
3R 32079331 3R 29922353..29922691 141..476 625 79.6 Plus
3R 32079331 3R 29924138..29924476 476..141 625 79.6 Minus
2L 23513712 2L 4950282..4950676 517..99 615 77.6 Minus
3R 32079331 3R 30489083..30489443 119..476 615 78.7 Plus
3R 32079331 3R 30487448..30487808 476..119 585 78.1 Minus
2R 25286936 2R 8691573..8691974 119..523 520 75.8 Plus
2L 23513712 2L 4952659..4953001 458..122 460 77 Minus
Blast to na_te.dros performed on 2014-11-28 18:27:29 has no hits.

FMO12636.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:57 Download gff for FMO12636.5prime
Subject Subject Range Query Range Percent Splice Strand
Jon25Bi-RA 207..1040 1..840 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:56:14 Download gff for FMO12636.5prime
Subject Subject Range Query Range Percent Splice Strand
Jon25Bi-RB 1..831 7..840 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:41 Download gff for FMO12636.5prime
Subject Subject Range Query Range Percent Splice Strand
Jon25Bi-RB 1..831 7..840 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:41 Download gff for FMO12636.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 4954314..4955147 1..840 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:56:14 Download gff for FMO12636.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4954314..4955147 1..840 97   Minus