FMO12637.5prime Sequence
497 bp (497 high quality bases) assembled on 2013-01-17
> FMO12637.5prime
CAGTCGACATGTCCTTCGTTAAGAACGCCCGTTTGCTGGCCGCCCGCGGC
GCTCGCTTGGCCCAGAACCGCAGCTACTCGGATGAGATGAAGCTGACCTT
CGCCGCCGCCAACAAAACCTTCTACGATGCCGCTGTGGTGCGCCAAATCG
ATGTGCCTTCCTTCTCGGGATCCTTCGGCATCCTGGCCAAGCACGTGCCC
ACTCTGGCTGTCCTGAAGCCCGGCGTTGTCCAGGTGGTGGAAAACGATGG
CAAGACCCTCAAGTTCTTCGTCTCCAGCGGTTCCGTCACCGTCAACGAGG
ATTCCTCCGTTCAGGTTCTGGCCGAGGAGGCCCACAACATCGAGGACATC
GATGCCAATGAGGCGCGCCAGCTGCTCGCGAAATACCAGTCACAGCTTAG
CTCCGCTGGCGACGACAAGGCCAAGGCCCAGGCTGCCATTGCCGTGGAGG
TCGCCGAAGCGTTAGTCAAGGCTGCCGAAGCAAGCTTTCTAGACCAT
FMO12637.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:28:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(1)G0230-RC | 3817 | CG2968-RC | 112..582 | 9..479 | 2355 | 100 | Plus |
| l(1)G0230-RB | 978 | CG2968-RB | 112..582 | 9..479 | 2355 | 100 | Plus |
| l(1)G0230-RA | 666 | CG2968-RA | 112..582 | 9..479 | 2355 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:28:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10213559..10213772 | 207..420 | 1070 | 100 | Plus |
| X | 23542271 | X | 10213287..10213485 | 9..207 | 995 | 100 | Plus |
| X | 23542271 | X | 10214097..10214158 | 418..479 | 310 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:28:44 has no hits.
FMO12637.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:08:05 Download gff for
FMO12637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0230-RA | 101..580 | 1..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:56:57 Download gff for
FMO12637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0230-RA | 103..582 | 1..479 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:17 Download gff for
FMO12637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0230-RA | 103..582 | 1..479 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:18:17 Download gff for
FMO12637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10213278..10213485 | 1..207 | 98 | -> | Plus |
| X | 10213560..10213771 | 208..419 | 100 | -> | Plus |
| X | 10214099..10214158 | 420..479 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:56:57 Download gff for
FMO12637.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10107311..10107518 | 1..207 | 98 | -> | Plus |
| arm_X | 10107593..10107804 | 208..419 | 100 | -> | Plus |
| arm_X | 10108132..10108191 | 420..479 | 100 | | Plus |
