Clone FMO12648 Report

Search the DGRC for FMO12648

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:126
Well:48
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14721-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12648.5prime Sequence

995 bp (879 high quality bases) assembled on 2013-01-17

> FMO12648.5prime
CAGTCGACATGATTTTGGTTAAATTATATGGGACGGGCGGCTGCACAATG
ACGGCGGCAGGCGCTCCAGGGTCCGCCTTAAATTGGATGCGCCGCTCTCG
CCACGGATTCGGTTTGATCCGAATCACGCGAGTTGGCAGGCCGGCGCACC
AACGCACCACCCATTCCGCCACCCACCGCTTCCTTTGCACAAAAACAACA
ATCGGATTTCGGCAGCAAATGGACCACACAATACCGCCCAAAGAGTACAA
ATGGACGCCGGGCAACCTGATCAACGAGAACTTTAAGCTGGGCGACCATG
GACACGTTTGCGTGGTGCTCAATCGGCAGATTCAAGTGCCGGCGCACGTG
GTGAAACTGCTATGGAAAAACGCCGCCGTTCGGTGTGCTGTCGATGGAGG
CTCCAACCACTGGCGTGACTTTGTCGTGGCTCAGGCAATGTCAAAGAAGG
CCAATGGCTCCGCGCCCACGACACCACTTGAACCGCTCGATGTGATAACG
GGTGACTTCGACTCGATCACTGAGGAAACGGTCGATTTCTTCAAGACCAC
GCCGAAAGTCCACACACCCGACCAGGATGCAACAGATTTCACGAAGGCCA
TGGCCGTACTGCAACCCGTAATGACGCAGCGTAAAATCCAGGATGTGGTG
GTGTTTCATGACACTTCCGGTCGCTTGCACCAGGTCATGGCCAACCTAAA
CACGCTGTACAAATCGCAAAAGGATAACTGCAATGTCTTCCTGTTGAGCG
GGGATTCGGTGACGTGGTTATTGCGGCCGGGAAAGCACACGATACTGGTG
CCCGTCGACCTGGTCACCAGCCAGCGATGGTGCTCTCCTGATGCCCGTGG
GATCGTCGGCCACAATTGTCACTACCACGGAAATCAAATGGAAACCTAAT
TCATGCACAGCTGGGAGTTGGTGGAATGCATGCACCCTCAAACCCCTATG
CGTACCAAGTCGTCCAGGTGGGAGAGCGAACCCCACCTGATATGT

FMO12648.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:28:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG14721-RA 1248 CG14721-RA 48..1008 9..971 4405 97.7 Plus
CG14721-RB 1142 CG14721-RB 1..839 131..971 3795 97.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:28:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11735918..11736438 372..893 2425 98.1 Plus
3R 32079331 3R 11735494..11735857 9..372 1820 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:28:37 has no hits.

FMO12648.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:08:04 Download gff for FMO12648.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 48..1027 9..991 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:56:53 Download gff for FMO12648.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 48..1027 9..991 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:14 Download gff for FMO12648.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14721-RA 48..1027 9..991 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:18:14 Download gff for FMO12648.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11735494..11735857 9..372 100 -> Plus
3R 11735919..11736443 373..898 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:56:53 Download gff for FMO12648.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7561216..7561579 9..372 100 -> Plus
arm_3R 7561641..7562165 373..898 98 -> Plus