FMO12648.5prime Sequence
995 bp (879 high quality bases) assembled on 2013-01-17
> FMO12648.5prime
CAGTCGACATGATTTTGGTTAAATTATATGGGACGGGCGGCTGCACAATG
ACGGCGGCAGGCGCTCCAGGGTCCGCCTTAAATTGGATGCGCCGCTCTCG
CCACGGATTCGGTTTGATCCGAATCACGCGAGTTGGCAGGCCGGCGCACC
AACGCACCACCCATTCCGCCACCCACCGCTTCCTTTGCACAAAAACAACA
ATCGGATTTCGGCAGCAAATGGACCACACAATACCGCCCAAAGAGTACAA
ATGGACGCCGGGCAACCTGATCAACGAGAACTTTAAGCTGGGCGACCATG
GACACGTTTGCGTGGTGCTCAATCGGCAGATTCAAGTGCCGGCGCACGTG
GTGAAACTGCTATGGAAAAACGCCGCCGTTCGGTGTGCTGTCGATGGAGG
CTCCAACCACTGGCGTGACTTTGTCGTGGCTCAGGCAATGTCAAAGAAGG
CCAATGGCTCCGCGCCCACGACACCACTTGAACCGCTCGATGTGATAACG
GGTGACTTCGACTCGATCACTGAGGAAACGGTCGATTTCTTCAAGACCAC
GCCGAAAGTCCACACACCCGACCAGGATGCAACAGATTTCACGAAGGCCA
TGGCCGTACTGCAACCCGTAATGACGCAGCGTAAAATCCAGGATGTGGTG
GTGTTTCATGACACTTCCGGTCGCTTGCACCAGGTCATGGCCAACCTAAA
CACGCTGTACAAATCGCAAAAGGATAACTGCAATGTCTTCCTGTTGAGCG
GGGATTCGGTGACGTGGTTATTGCGGCCGGGAAAGCACACGATACTGGTG
CCCGTCGACCTGGTCACCAGCCAGCGATGGTGCTCTCCTGATGCCCGTGG
GATCGTCGGCCACAATTGTCACTACCACGGAAATCAAATGGAAACCTAAT
TCATGCACAGCTGGGAGTTGGTGGAATGCATGCACCCTCAAACCCCTATG
CGTACCAAGTCGTCCAGGTGGGAGAGCGAACCCCACCTGATATGT
FMO12648.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:28:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14721-RA | 1248 | CG14721-RA | 48..1008 | 9..971 | 4405 | 97.7 | Plus |
CG14721-RB | 1142 | CG14721-RB | 1..839 | 131..971 | 3795 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:28:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11735918..11736438 | 372..893 | 2425 | 98.1 | Plus |
3R | 32079331 | 3R | 11735494..11735857 | 9..372 | 1820 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:28:37 has no hits.
FMO12648.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:08:04 Download gff for
FMO12648.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14721-RA | 48..1027 | 9..991 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:56:53 Download gff for
FMO12648.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14721-RA | 48..1027 | 9..991 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:14 Download gff for
FMO12648.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14721-RA | 48..1027 | 9..991 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:18:14 Download gff for
FMO12648.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11735494..11735857 | 9..372 | 100 | -> | Plus |
3R | 11735919..11736443 | 373..898 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:56:53 Download gff for
FMO12648.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7561216..7561579 | 9..372 | 100 | -> | Plus |
arm_3R | 7561641..7562165 | 373..898 | 98 | -> | Plus |