FMO12650.5prime Sequence
533 bp (533 high quality bases) assembled on 2013-01-17
> FMO12650.5prime
CAGTCGACATGTCCAGCAAGAAGCGCATAGATTTAAAGCCCGCGTCCTTC
GAAGACTTGGCCAATCAGGTGTTCGAAAAGTCGAAACAGATGAGTATGTC
AATGAAGGAGCAGTGCAAGTTGGTCCAGGAGTATCTGAAGGCTAGGCTCG
ATGGGAGTGATGGAAGCGATGCAGAATATAATAGTGATTCCTATTCAGAT
TTTGAATCCGAGTCGGATTCCGATTCCGATTCCGATTTCGAGGAGGATTC
CCTTACTGATTCCGATGAGCAAACAGAGGAGAGCAGTGATGAGTCCGAAT
CGGAACACAGTGAAGTCGAGGAGCGTACCAAACCATCAGATACTCACAAG
ACTACCAACGGAGGGCTCTGCGAAAAACCAATCTCCAAGGTCGAGCCTGA
ACAATCTCGGCTCGTGGCCTTTGTGGCTCCTCTCAAATCCCCTGCCCCCC
GCATCCACCGTCGACTGACTATGGCTGGTGGCGTTATAGCTCCTCATAGT
CGCAGTAGTGCCTTCGCAAGCTTTCTAGACCAT
FMO12650.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:29:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4375-RA | 793 | CG4375-RA | 113..619 | 9..515 | 2460 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:29:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1026279..1026785 | 515..9 | 2460 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:29:51 has no hits.
FMO12650.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:08:12 Download gff for
FMO12650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4375-RA | 104..622 | 1..519 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:34 Download gff for
FMO12650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4375-RA | 104..622 | 1..519 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:57 Download gff for
FMO12650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4375-RA | 104..622 | 1..519 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:18:57 Download gff for
FMO12650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1026275..1026790 | 1..519 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:34 Download gff for
FMO12650.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1026275..1026790 | 1..519 | 97 | | Minus |
