FMO12658.5prime Sequence
287 bp (287 high quality bases) assembled on 2013-01-17
> FMO12658.5prime
CAGTCGACATGAGACACGTGCAGTTTCTGGCCCGCACCGTTCTGGTGCAA
AACAATAATGTGGAGGAGGCGTGTCGTCTGTTAAATCGCGTCTTGGGAAA
AGAAGAACTGCTCGACCAATTTCGCCGCACGCGATTCTACGAAAAGCCGT
ATCAGGTTCGTCGTCGCATCAACTTCGAGAAATGCAAGGCCATTTACAAC
GAGGACATGAACCGAAAAATTCAGTTCGTACTGCGCAAAAATCGCGCCGA
ACCTTTTCCTGGATGCAGTGCAAGCTTTCTAGACCAT
FMO12658.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:29:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpS21-RB | 475 | CG32854-RB | 97..361 | 5..269 | 1310 | 99.6 | Plus |
mRpS21-RA | 422 | CG32854-RA | 97..361 | 5..269 | 1310 | 99.6 | Plus |
CG8870-RA | 1535 | CG8870-RA | 1416..1531 | 269..154 | 580 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:29:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13381558..13381713 | 160..5 | 765 | 99.4 | Minus |
3R | 32079331 | 3R | 13381390..13381505 | 269..154 | 580 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:29:31 has no hits.
FMO12658.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:08:10 Download gff for
FMO12658.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS21-RA | 76..350 | 1..276 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:24 Download gff for
FMO12658.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS21-RA | 93..367 | 1..276 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:43 Download gff for
FMO12658.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS21-RA | 93..367 | 1..276 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:18:43 Download gff for
FMO12658.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13381384..13381503 | 156..276 | 97 | <- | Minus |
3R | 13381563..13381714 | 1..155 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:24 Download gff for
FMO12658.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9207106..9207225 | 156..276 | 97 | <- | Minus |
arm_3R | 9207285..9207436 | 1..155 | 97 | | Minus |