Clone FMO12660 Report

Search the DGRC for FMO12660

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:126
Well:60
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG32736-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12660.5prime Sequence

263 bp (263 high quality bases) assembled on 2013-01-17

> FMO12660.5prime
CAGTCGACATGAGTCCGTACAGCGGATCCGTGCGTCGTCTGCTGGACAGT
TGGCCAGGAAAGAAGCGCTTCGGTGTCTACCGCTTCCTGCCGCTCTTCTT
TTTACTGGGCGCCGGCCTGGAATTCTCCATGATCAATTGGACAGTGGGCG
AGACCAATTTCTACCGCACTTTTAAGCGCCGCCAGGCGAAGAACTACGTG
GAAGAGCAGCAGCATCTGCAGGCGCGAGCCGCGAATAACACCAACGCAAG
CTTTCTAGACCAT

FMO12660.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:29:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG42308-RB 640 CG42308-RB 165..403 7..245 1195 100 Plus
CG42308-RA 635 CG42308-RA 160..398 7..245 1195 100 Plus
CG32736-RB 635 CG32736-RB 160..398 7..245 1195 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:29:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7011601..7011756 7..162 780 100 Plus
X 23542271 X 7011818..7011900 163..245 415 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:29:44 has no hits.

FMO12660.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:08:11 Download gff for FMO12660.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32736-RB 151..399 1..251 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:31 Download gff for FMO12660.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42308-RB 107..355 1..251 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:52 Download gff for FMO12660.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32736-RB 155..403 1..251 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:18:52 Download gff for FMO12660.5prime
Subject Subject Range Query Range Percent Splice Strand
X 7011596..7011756 1..162 97 -> Plus
X 7011818..7011905 163..251 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:31 Download gff for FMO12660.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6905629..6905789 1..162 97 -> Plus
arm_X 6905851..6905938 163..251 97   Plus