FMO12662.5prime Sequence
311 bp (311 high quality bases) assembled on 2013-01-17
> FMO12662.5prime
CAGTCGACATGTTCAAAGTACTGTTCGTGCTCGCCGCCTTCGTCGCCTCT
CAGGCTATCGCCCATCCCGGCGTGGTGGCCGTGGCACCCGTGGTGGCGCA
CCCGGCGGTGGTCCACACGCCCATCATCCATCATGGAGCCCACTCGGTGC
ACTCCCATGTTGTTCATCATCCGGCAGCCGTCAAGGTCATCACACCCGTC
GTCCACAAGCCCGTGGTGGCGGTGCATGCTGTCAAGCCGGTGGTTCCATT
GGTTCCAGTGCATCATGCCGCCCCCGCCGTCGTCGTGCATCATGCAAGCT
TTCTAGACCAT
FMO12662.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:22:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17298-RA | 495 | CG17298-RA | 79..363 | 9..293 | 1410 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:22:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 21283780..21283918 | 155..293 | 680 | 99.3 | Plus |
3R | 32079331 | 3R | 21283584..21283717 | 21..154 | 670 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:22:31 has no hits.
FMO12662.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:26 Download gff for
FMO12662.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17298-RA | 72..367 | 1..298 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:08 Download gff for
FMO12662.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17298-RA | 72..367 | 1..298 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:14:59 Download gff for
FMO12662.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17298-RA | 72..367 | 1..298 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:59 Download gff for
FMO12662.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 21283584..21283717 | 21..154 | 100 | -> | Plus |
3R | 21283780..21283922 | 155..298 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:08 Download gff for
FMO12662.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 17109306..17109439 | 21..154 | 100 | -> | Plus |
arm_3R | 17109502..17109644 | 155..298 | 97 | | Plus |