FMO12665.5prime Sequence
374 bp (374 high quality bases) assembled on 2013-01-17
> FMO12665.5prime
CAGTCGACATGACAAACCGATGCGCTTGCTTCGCCTTGGCCTTCCTCCTC
TTCTGCCTCTTGGCCATCTCGAGCATCGAGGCAGCTCCGATGCCCAGCCA
ATCCAATGGAGGATACGGTGGCGCTGGCTATAACGAACTGGAGGAGGTGC
CCGACGACCTACTCATGGAACTGATGACTCGCTTTGGACGCACCATCATA
CGGGCTCGAAACGATCTGGAGAATTCCAAACGAACCGTGGACTTTGGCTT
GGCCCGGGGATATTCGGGTACCCAGGAGGCGAAACATCGCATGGGTCTGG
CTGCAGCCAACTTTGCCGGAGGACCCGGTCGGAGGCGACGATCCGAGACC
GATGTCGCAAGCTTTCTAGACCAT
FMO12665.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:22:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dh31-RA | 1292 | CG13094-RA | 143..490 | 9..356 | 1740 | 100 | Plus |
Dh31-RC | 1295 | CG13094-RC | 143..493 | 9..356 | 1700 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:22:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8492670..8492802 | 356..224 | 665 | 100 | Minus |
2L | 23513712 | 2L | 8492967..8493094 | 223..96 | 640 | 100 | Minus |
2L | 23513712 | 2L | 8493747..8493835 | 97..9 | 445 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:22:44 has no hits.
FMO12665.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-17 11:07:28 Download gff for
FMO12665.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dh31-RA | 143..494 | 9..361 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:17 Download gff for
FMO12665.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dh31-RA | 143..494 | 9..361 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:06 Download gff for
FMO12665.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dh31-RA | 143..494 | 9..361 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:06 Download gff for
FMO12665.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8492666..8492802 | 224..361 | 98 | <- | Minus |
2L | 8492967..8493092 | 98..223 | 100 | <- | Minus |
2L | 8493747..8493835 | 9..97 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:17 Download gff for
FMO12665.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8492666..8492802 | 224..361 | 98 | <- | Minus |
arm_2L | 8492967..8493092 | 98..223 | 100 | <- | Minus |
arm_2L | 8493747..8493835 | 9..97 | 100 | | Minus |